RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
PHF3-203ENST00000420043 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
PHF3-203ENST00000420043 FLT4P35916 1363 aa13.46□□□□□ -0.25
PHF3-203ENST00000420043 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
PHF3-203ENST00000420043 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.25
PHF3-203ENST00000420043 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
PHF3-203ENST00000420043 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
PHF3-203ENST00000420043 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
PHF3-203ENST00000420043 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
PHF3-203ENST00000420043 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
PHF3-203ENST00000420043 U3KPZ7 1027 aaPredicted RBP13.45□□□□□ -0.26
PHF3-203ENST00000420043 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
PHF3-203ENST00000420043 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
PHF3-203ENST00000420043 RIPK4P57078 832 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 HSP90AB2PQ58FF8 381 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 MYH16Q9H6N6 1097 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
PHF3-203ENST00000420043 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
PHF3-203ENST00000420043 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
PHF3-203ENST00000420043 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
PHF3-203ENST00000420043 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
PHF3-203ENST00000420043 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
PHF3-203ENST00000420043 EVA1CP58658 441 aa13.42□□□□□ -0.26
PHF3-203ENST00000420043 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
PHF3-203ENST00000420043 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
PHF3-203ENST00000420043 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.42□□□□□ -0.26
PHF3-203ENST00000420043 RTL1A6NKG5 1358 aa13.42□□□□□ -0.26
PHF3-203ENST00000420043 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
PHF3-203ENST00000420043 HOXC9P31274 260 aa13.41□□□□□ -0.26
PHF3-203ENST00000420043 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
PHF3-203ENST00000420043 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
PHF3-203ENST00000420043 PEAK1Q9H792 1746 aa13.41□□□□□ -0.26
PHF3-203ENST00000420043 CRYBG1Q9Y4K1 1723 aa13.41□□□□□ -0.26
PHF3-203ENST00000420043 IL16Q14005 1332 aa13.4□□□□□ -0.26
PHF3-203ENST00000420043 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
PHF3-203ENST00000420043 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
PHF3-203ENST00000420043 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
PHF3-203ENST00000420043 GCP02774 474 aa13.39□□□□□ -0.27
PHF3-203ENST00000420043 BAG6P46379 1132 aa13.39□□□□□ -0.27
PHF3-203ENST00000420043 PHACTR3Q96KR7 559 aa13.39□□□□□ -0.27
PHF3-203ENST00000420043 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
PHF3-203ENST00000420043 IP6K1Q92551 441 aa13.38□□□□□ -0.27
PHF3-203ENST00000420043 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
PHF3-203ENST00000420043 TRIM37O94972 964 aa13.37□□□□□ -0.27
PHF3-203ENST00000420043 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
PHF3-203ENST00000420043 PHRF1Q9P1Y6 1649 aaKnown RBP13.37□□□□□ -0.27
PHF3-203ENST00000420043 NFAT5O94916 1531 aa13.37□□□□□ -0.27
PHF3-203ENST00000420043 USP19O94966 1318 aa13.37□□□□□ -0.27
PHF3-203ENST00000420043 SLIT3O75094 1523 aa13.36□□□□□ -0.27
PHF3-203ENST00000420043 EYA1Q99502 592 aa13.36□□□□□ -0.27
PHF3-203ENST00000420043 CAMTA1Q9Y6Y1 1673 aa13.36□□□□□ -0.27
PHF3-203ENST00000420043 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
PHF3-203ENST00000420043 EZH2Q15910 746 aaKnown RBP13.35□□□□□ -0.27
PHF3-203ENST00000420043 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
PHF3-203ENST00000420043 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
PHF3-203ENST00000420043 GAS2L2Q8NHY3 880 aa13.34□□□□□ -0.27
PHF3-203ENST00000420043 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
PHF3-203ENST00000420043 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
PHF3-203ENST00000420043 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
PHF3-203ENST00000420043 CPDO75976 1380 aa13.33□□□□□ -0.27
PHF3-203ENST00000420043 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
PHF3-203ENST00000420043 PLIN1O60240 522 aa13.33□□□□□ -0.28
PHF3-203ENST00000420043 GNAI1P63096 354 aa13.33□□□□□ -0.28
PHF3-203ENST00000420043 FAM196AQ6ZSG2 479 aa13.33□□□□□ -0.28
PHF3-203ENST00000420043 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
PHF3-203ENST00000420043 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
PHF3-203ENST00000420043 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
PHF3-203ENST00000420043 APBA3O96018 575 aa13.32□□□□□ -0.28
PHF3-203ENST00000420043 R3HDM1Q15032 1099 aaKnown RBP13.32□□□□□ -0.28
PHF3-203ENST00000420043 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
PHF3-203ENST00000420043 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
PHF3-203ENST00000420043 LTN1O94822 1766 aa13.32□□□□□ -0.28
PHF3-203ENST00000420043 KDRP35968 1356 aa13.32□□□□□ -0.28
PHF3-203ENST00000420043 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
PHF3-203ENST00000420043 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
PHF3-203ENST00000420043 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
PHF3-203ENST00000420043 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
PHF3-203ENST00000420043 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
PHF3-203ENST00000420043 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
PHF3-203ENST00000420043 LMO7Q8WWI1 1683 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 BCAR3O75815 825 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 RARSP54136 660 aaKnown RBP13.29□□□□□ -0.28
PHF3-203ENST00000420043 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
PHF3-203ENST00000420043 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
PHF3-203ENST00000420043 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
PHF3-203ENST00000420043 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
PHF3-203ENST00000420043 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
PHF3-203ENST00000420043 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
PHF3-203ENST00000420043 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.29
PHF3-203ENST00000420043 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
PHF3-203ENST00000420043 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
PHF3-203ENST00000420043 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
PHF3-203ENST00000420043 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
PHF3-203ENST00000420043 DISP2A7MBM2 1401 aa13.26□□□□□ -0.29
PHF3-203ENST00000420043 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms