RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 WDR90Q96KV7 1748 aa15.26■□□□□ 0.03
RAPGEF1-205ENST00000419442 EVC2Q86UK5 1308 aa15.25■□□□□ 0.03
RAPGEF1-205ENST00000419442 ADRA2BP18089 450 aa15.25■□□□□ 0.03
RAPGEF1-205ENST00000419442 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
RAPGEF1-205ENST00000419442 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF1-205ENST00000419442 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-205ENST00000419442 PRIM1P49642 420 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-205ENST00000419442 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
RAPGEF1-205ENST00000419442 TOGARAM1Q9Y4F4 1720 aa15.21■□□□□ 0.03
RAPGEF1-205ENST00000419442 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
RAPGEF1-205ENST00000419442 MSH5O43196 834 aa15.2■□□□□ 0.02
RAPGEF1-205ENST00000419442 TOMM70O94826 608 aa15.2■□□□□ 0.02
RAPGEF1-205ENST00000419442 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 COL13A1Q5TAT6 717 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 JMYQ8N9B5 988 aa15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 RGPD2P0DJD1 1756 aa15.19■□□□□ 0.02
RAPGEF1-205ENST00000419442 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
RAPGEF1-205ENST00000419442 CD163L1Q9NR16 1453 aa15.18■□□□□ 0.02
RAPGEF1-205ENST00000419442 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
RAPGEF1-205ENST00000419442 KIF13BQ9NQT8 1826 aa15.17■□□□□ 0.02
RAPGEF1-205ENST00000419442 USP47Q96K76 1375 aa15.17■□□□□ 0.02
RAPGEF1-205ENST00000419442 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
RAPGEF1-205ENST00000419442 PRELPP51888 382 aa15.16■□□□□ 0.02
RAPGEF1-205ENST00000419442 NME9Q86XW9 330 aa15.16■□□□□ 0.02
RAPGEF1-205ENST00000419442 HMGB2P26583 209 aaKnown RBP15.15■□□□□ 0.02
RAPGEF1-205ENST00000419442 IP6K1Q92551 441 aa15.15■□□□□ 0.02
RAPGEF1-205ENST00000419442 MEGF6O75095 1541 aa15.15■□□□□ 0.02
RAPGEF1-205ENST00000419442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
RAPGEF1-205ENST00000419442 KLRG1Q96E93 195 aa15.14■□□□□ 0.01
RAPGEF1-205ENST00000419442 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-205ENST00000419442 RBM46Q8TBY0 533 aaKnown RBP15.12■□□□□ 0.01
RAPGEF1-205ENST00000419442 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
RAPGEF1-205ENST00000419442 EDC4Q6P2E9 1401 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-205ENST00000419442 MAP2P11137 1827 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-205ENST00000419442 ITGB4P16144 1822 aa15.11■□□□□ 0.01
RAPGEF1-205ENST00000419442 TNS4Q8IZW8 715 aa15.11■□□□□ 0.01
RAPGEF1-205ENST00000419442 WWC3Q9ULE0 1092 aa15.11■□□□□ 0.01
RAPGEF1-205ENST00000419442 CAPN15O75808 1086 aa15.1■□□□□ 0.01
RAPGEF1-205ENST00000419442 AMIGO3Q86WK7 504 aa15.1■□□□□ 0.01
RAPGEF1-205ENST00000419442 NMRK2Q9NPI5 230 aa15.1■□□□□ 0.01
RAPGEF1-205ENST00000419442 N4BP2Q86UW6 1770 aaPredicted RBP15.1■□□□□ 0.01
RAPGEF1-205ENST00000419442 PALLDQ8WX93 1383 aa15.1■□□□□ 0.01
RAPGEF1-205ENST00000419442 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
RAPGEF1-205ENST00000419442 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
RAPGEF1-205ENST00000419442 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
RAPGEF1-205ENST00000419442 FSTL1Q12841 308 aa15.08■□□□□ 0
RAPGEF1-205ENST00000419442 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
RAPGEF1-205ENST00000419442 CGNL1Q0VF96 1302 aa15.08■□□□□ 0
RAPGEF1-205ENST00000419442 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0
RAPGEF1-205ENST00000419442 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
RAPGEF1-205ENST00000419442 HTRA3P83110 453 aa15.07■□□□□ 0
RAPGEF1-205ENST00000419442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
RAPGEF1-205ENST00000419442 HOXC9P31274 260 aa15.06■□□□□ 0
RAPGEF1-205ENST00000419442 AK7Q96M32 723 aa15.06■□□□□ 0
RAPGEF1-205ENST00000419442 SSFA2P28290 1259 aa15.05■□□□□ -0
RAPGEF1-205ENST00000419442 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
RAPGEF1-205ENST00000419442 TNRC6CQ9HCJ0 1690 aaKnown RBP15.05■□□□□ -0
RAPGEF1-205ENST00000419442 PLEKHG2Q9H7P9 1386 aa15.04■□□□□ -0
RAPGEF1-205ENST00000419442 HDGFL2Q7Z4V5 671 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-205ENST00000419442 A0A1W2PP64 1363 aa15.03■□□□□ -0
RAPGEF1-205ENST00000419442 RTL1A6NKG5 1358 aa15.03■□□□□ -0
RAPGEF1-205ENST00000419442 TGFB2P61812 414 aa15.03■□□□□ -0
RAPGEF1-205ENST00000419442 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-205ENST00000419442 ROCK2O75116 1388 aaKnown RBP15.02■□□□□ -0
RAPGEF1-205ENST00000419442 PHF14O94880 888 aa15.02■□□□□ -0
RAPGEF1-205ENST00000419442 SLC34A2O95436 690 aa15.02■□□□□ -0
RAPGEF1-205ENST00000419442 SMIM5Q71RC9 77 aa15.02■□□□□ -0
RAPGEF1-205ENST00000419442 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
RAPGEF1-205ENST00000419442 PCDH11XQ9BZA7 1347 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 PCDH11YQ9BZA8 1340 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 NBPF6Q5VWK0 638 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 NBPF4Q96M43 638 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 SBF1O95248 1867 aa15.01□□□□□ -0.01
RAPGEF1-205ENST00000419442 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-205ENST00000419442 TERF2IPQ9NYB0 399 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 BCS1LQ9Y276 419 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 KCPQ6ZWJ8 1503 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 C4AP0C0L4 1744 aa15□□□□□ -0.01
RAPGEF1-205ENST00000419442 MMP10P09238 476 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 KCNA4P22459 653 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 AMPHP49418 695 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 LINC00116Q8NCU8 138 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 RAPGEF4Q8WZA2 1011 aa14.99□□□□□ -0.01
RAPGEF1-205ENST00000419442 CYP27B1O15528 508 aa14.98□□□□□ -0.01
RAPGEF1-205ENST00000419442 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF1-205ENST00000419442 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
RAPGEF1-205ENST00000419442 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-205ENST00000419442 KDM2BQ8NHM5 1336 aa14.97□□□□□ -0.01
RAPGEF1-205ENST00000419442 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
RAPGEF1-205ENST00000419442 A0A0G2JLW4 131 aa14.97□□□□□ -0.01
RAPGEF1-205ENST00000419442 HSPA1AP0DMV8 641 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-205ENST00000419442 HSPA1BP0DMV9 641 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-205ENST00000419442 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms