RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
EPCAM-203ENST00000419334 PLEKHG2Q9H7P9 1386 aa23.81■■□□□ 1.4
EPCAM-203ENST00000419334 ZCRB1Q8TBF4 217 aaKnown RBP23.81■■□□□ 1.4
EPCAM-203ENST00000419334 DIAPH1O60610 1272 aaKnown RBP23.8■■□□□ 1.4
EPCAM-203ENST00000419334 RALBP1Q15311 655 aa23.8■■□□□ 1.4
EPCAM-203ENST00000419334 KDRP35968 1356 aa23.78■■□□□ 1.4
EPCAM-203ENST00000419334 CFAP53Q96M91 514 aa23.78■■□□□ 1.4
EPCAM-203ENST00000419334 SF3B2Q13435 895 aaKnown RBP23.77■■□□□ 1.4
EPCAM-203ENST00000419334 TRIM37O94972 964 aa23.76■■□□□ 1.39
EPCAM-203ENST00000419334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.76■■□□□ 1.39
EPCAM-203ENST00000419334 PCDH11XQ9BZA7 1347 aa23.76■■□□□ 1.39
EPCAM-203ENST00000419334 PCDH11YQ9BZA8 1340 aa23.76■■□□□ 1.39
EPCAM-203ENST00000419334 SULT6B1Q6IMI4 303 aa23.75■■□□□ 1.39
EPCAM-203ENST00000419334 DDX54Q8TDD1 881 aaKnown RBP23.75■■□□□ 1.39
EPCAM-203ENST00000419334 NHSQ6T4R5 1651 aa23.75■■□□□ 1.39
EPCAM-203ENST00000419334 AEBP1Q8IUX7 1158 aa23.74■■□□□ 1.39
EPCAM-203ENST00000419334 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
EPCAM-203ENST00000419334 DOT1LQ8TEK3 1739 aa23.72■■□□□ 1.39
EPCAM-203ENST00000419334 KAT6BQ8WYB5 2073 aa23.72■■□□□ 1.39
EPCAM-203ENST00000419334 MYBBP1AQ9BQG0 1328 aaKnown RBP23.7■■□□□ 1.38
EPCAM-203ENST00000419334 CYP27B1O15528 508 aa23.7■■□□□ 1.38
EPCAM-203ENST00000419334 BAG6P46379 1132 aa23.7■■□□□ 1.38
EPCAM-203ENST00000419334 BCL11BQ9C0K0 894 aaPredicted RBP23.7■■□□□ 1.38
EPCAM-203ENST00000419334 PRKRIP1Q9H875 184 aaPredicted RBP23.7■■□□□ 1.38
EPCAM-203ENST00000419334 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
EPCAM-203ENST00000419334 HMOX1P09601 288 aa23.68■■□□□ 1.38
EPCAM-203ENST00000419334 DEFB132Q7Z7B7 95 aa23.68■■□□□ 1.38
EPCAM-203ENST00000419334 NUDCQ9Y266 331 aa23.68■■□□□ 1.38
EPCAM-203ENST00000419334 RGPD3A6NKT7 1758 aaPredicted RBP23.68■■□□□ 1.38
EPCAM-203ENST00000419334 RGPD4Q7Z3J3 1758 aa23.68■■□□□ 1.38
EPCAM-203ENST00000419334 AMOTQ4VCS5 1084 aa23.67■■□□□ 1.38
EPCAM-203ENST00000419334 PLEKHO1Q53GL0 409 aaPredicted RBP23.67■■□□□ 1.38
EPCAM-203ENST00000419334 BTAF1O14981 1849 aa23.66■■□□□ 1.38
EPCAM-203ENST00000419334 APBA3O96018 575 aa23.66■■□□□ 1.38
EPCAM-203ENST00000419334 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
EPCAM-203ENST00000419334 TOGARAM1Q9Y4F4 1720 aa23.65■■□□□ 1.38
EPCAM-203ENST00000419334 KCNQ2O43526 872 aa23.65■■□□□ 1.38
EPCAM-203ENST00000419334 NKX1-1Q15270 411 aaPredicted RBP23.65■■□□□ 1.38
EPCAM-203ENST00000419334 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
EPCAM-203ENST00000419334 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
EPCAM-203ENST00000419334 PHKG2P15735 406 aa23.64■■□□□ 1.37
EPCAM-203ENST00000419334 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
EPCAM-203ENST00000419334 ITGB4P16144 1822 aa23.63■■□□□ 1.37
EPCAM-203ENST00000419334 RREB1Q92766 1687 aa23.62■■□□□ 1.37
EPCAM-203ENST00000419334 PLSCR1O15162 318 aa23.61■■□□□ 1.37
EPCAM-203ENST00000419334 U2AF1L5P0DN76 240 aaPredicted RBP23.61■■□□□ 1.37
EPCAM-203ENST00000419334 U2AF1Q01081 240 aaKnown RBP eCLIP23.61■■□□□ 1.37
EPCAM-203ENST00000419334 ZNF530Q6P9A1 599 aaPredicted RBP23.61■■□□□ 1.37
EPCAM-203ENST00000419334 CAMKK2Q96RR4 588 aa23.61■■□□□ 1.37
EPCAM-203ENST00000419334 PRIM1P49642 420 aaKnown RBP23.6■■□□□ 1.37
EPCAM-203ENST00000419334 RSPH6AQ9H0K4 717 aa23.6■■□□□ 1.37
EPCAM-203ENST00000419334 FCHSD2O94868 740 aa23.58■■□□□ 1.37
EPCAM-203ENST00000419334 HSP90AB1P08238 724 aaKnown RBP23.58■■□□□ 1.37
EPCAM-203ENST00000419334 EZH2Q15910 746 aaKnown RBP23.58■■□□□ 1.37
EPCAM-203ENST00000419334 C1orf141Q5JVX7 400 aa23.58■■□□□ 1.37
EPCAM-203ENST00000419334 SYTL4Q96C24 671 aaPredicted RBP23.58■■□□□ 1.37
EPCAM-203ENST00000419334 VIRMAQ69YN4 1812 aaKnown RBP23.57■■□□□ 1.36
EPCAM-203ENST00000419334 SCN11AQ9UI33 1791 aa23.57■■□□□ 1.36
EPCAM-203ENST00000419334 NUP188Q5SRE5 1749 aa23.56■■□□□ 1.36
EPCAM-203ENST00000419334 PRKAR2BP31323 418 aa23.56■■□□□ 1.36
EPCAM-203ENST00000419334 DCAF5Q96JK2 942 aa23.56■■□□□ 1.36
EPCAM-203ENST00000419334 MTHFSDQ2M296 383 aaKnown RBP23.55■■□□□ 1.36
EPCAM-203ENST00000419334 AKAP4Q5JQC9 854 aa23.55■■□□□ 1.36
EPCAM-203ENST00000419334 KDM6AO15550 1401 aaPredicted RBP23.55■■□□□ 1.36
EPCAM-203ENST00000419334 ANP32CO43423 234 aa23.54■■□□□ 1.36
EPCAM-203ENST00000419334 LY75O60449 1722 aa23.53■■□□□ 1.36
EPCAM-203ENST00000419334 ADAMTS7Q9UKP4 1686 aa23.53■■□□□ 1.36
EPCAM-203ENST00000419334 MPRIPQ6WCQ1 1025 aa23.52■■□□□ 1.36
EPCAM-203ENST00000419334 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
EPCAM-203ENST00000419334 ERVV-2B6SEH9 535 aa23.51■■□□□ 1.35
EPCAM-203ENST00000419334 PHACTR3Q96KR7 559 aa23.51■■□□□ 1.35
EPCAM-203ENST00000419334 PROM2Q8N271 834 aa23.5■■□□□ 1.35
EPCAM-203ENST00000419334 TXNRD1Q16881 649 aa23.49■■□□□ 1.35
EPCAM-203ENST00000419334 TMOD3Q9NYL9 352 aa23.49■■□□□ 1.35
EPCAM-203ENST00000419334 PIGBQ92521 554 aa23.48■■□□□ 1.35
EPCAM-203ENST00000419334 PNNQ9H307 717 aaKnown RBP23.48■■□□□ 1.35
EPCAM-203ENST00000419334 MAP3K5Q99683 1374 aa23.48■■□□□ 1.35
EPCAM-203ENST00000419334 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
EPCAM-203ENST00000419334 MRC1P22897 1456 aa23.47■■□□□ 1.35
EPCAM-203ENST00000419334 NEFMP07197 916 aa23.46■■□□□ 1.35
EPCAM-203ENST00000419334 GNAT3A8MTJ3 354 aa23.45■■□□□ 1.34
EPCAM-203ENST00000419334 CABP4P57796 275 aa23.45■■□□□ 1.34
EPCAM-203ENST00000419334 WDR43Q15061 677 aaKnown RBP eCLIP23.45■■□□□ 1.34
EPCAM-203ENST00000419334 DLG5Q8TDM6 1919 aa23.45■■□□□ 1.34
EPCAM-203ENST00000419334 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
EPCAM-203ENST00000419334 PALLDQ8WX93 1383 aa23.44■■□□□ 1.34
EPCAM-203ENST00000419334 RNMTO43148 476 aaKnown RBP23.44■■□□□ 1.34
EPCAM-203ENST00000419334 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
EPCAM-203ENST00000419334 LGR6Q9HBX8 967 aa23.44■■□□□ 1.34
EPCAM-203ENST00000419334 SLC27A3Q5K4L6 730 aa23.43■■□□□ 1.34
EPCAM-203ENST00000419334 MAPK8IP3Q9UPT6 1336 aa23.41■■□□□ 1.34
EPCAM-203ENST00000419334 CCDC184Q52MB2 194 aa23.41■■□□□ 1.34
EPCAM-203ENST00000419334 NFATC2IPQ8NCF5 419 aa23.41■■□□□ 1.34
EPCAM-203ENST00000419334 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
EPCAM-203ENST00000419334 LRRC4BQ9NT99 713 aa23.41■■□□□ 1.34
EPCAM-203ENST00000419334 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
EPCAM-203ENST00000419334 NBPF14Q5TI25 921 aa23.4■■□□□ 1.34
EPCAM-203ENST00000419334 ASAP1Q9ULH1 1129 aa23.4■■□□□ 1.34
EPCAM-203ENST00000419334 ADAMTS8Q9UP79 889 aa23.4■■□□□ 1.34
EPCAM-203ENST00000419334 TAF1LQ8IZX4 1826 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms