RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 TMC1Q8TDI8 760 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
LINC02539-202ENST00000419220 ARHGEF10O15013 1369 aa9.3□□□□□ -0.92
LINC02539-202ENST00000419220 PSEN2P49810 448 aa9.3□□□□□ -0.92
LINC02539-202ENST00000419220 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
LINC02539-202ENST00000419220 Q6ZNB5 142 aa9.29□□□□□ -0.92
LINC02539-202ENST00000419220 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
LINC02539-202ENST00000419220 PPIP5K1Q6PFW1 1433 aa9.29□□□□□ -0.92
LINC02539-202ENST00000419220 SBNO1A3KN83 1393 aa9.28□□□□□ -0.92
LINC02539-202ENST00000419220 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
LINC02539-202ENST00000419220 RGPD8O14715 1765 aaPredicted RBP9.28□□□□□ -0.92
LINC02539-202ENST00000419220 PDE4AP27815 886 aa9.28□□□□□ -0.92
LINC02539-202ENST00000419220 E2F4Q16254 413 aa9.28□□□□□ -0.92
LINC02539-202ENST00000419220 ACEP12821 1306 aa9.28□□□□□ -0.92
LINC02539-202ENST00000419220 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
LINC02539-202ENST00000419220 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
LINC02539-202ENST00000419220 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
LINC02539-202ENST00000419220 DDX27Q96GQ7 796 aaKnown RBP9.26□□□□□ -0.93
LINC02539-202ENST00000419220 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
LINC02539-202ENST00000419220 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
LINC02539-202ENST00000419220 SPATA31A3Q5VYP0 1347 aa9.26□□□□□ -0.93
LINC02539-202ENST00000419220 TTC21AQ8NDW8 1320 aa9.26□□□□□ -0.93
LINC02539-202ENST00000419220 POLR3AO14802 1390 aaPredicted RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 KTN1Q86UP2 1357 aaKnown RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 ZNF772Q68DY9 489 aaPredicted RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
LINC02539-202ENST00000419220 TESK2Q96S53 571 aa9.25□□□□□ -0.93
LINC02539-202ENST00000419220 ATP7BP35670 1465 aa9.25□□□□□ -0.93
LINC02539-202ENST00000419220 SHPRHQ149N8 1683 aa9.25□□□□□ -0.93
LINC02539-202ENST00000419220 TNS3Q68CZ2 1445 aa9.24□□□□□ -0.93
LINC02539-202ENST00000419220 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
LINC02539-202ENST00000419220 KCNH5Q8NCM2 988 aa9.24□□□□□ -0.93
LINC02539-202ENST00000419220 PRR36Q9H6K5 1346 aa9.24□□□□□ -0.93
LINC02539-202ENST00000419220 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
LINC02539-202ENST00000419220 MFSD10Q14728 455 aa9.23□□□□□ -0.93
LINC02539-202ENST00000419220 THSD4Q6ZMP0 1018 aa9.23□□□□□ -0.93
LINC02539-202ENST00000419220 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
LINC02539-202ENST00000419220 NGLY1Q96IV0 654 aa9.23□□□□□ -0.93
LINC02539-202ENST00000419220 PXDNQ92626 1479 aa9.22□□□□□ -0.93
LINC02539-202ENST00000419220 PTCD2Q8WV60 388 aaKnown RBP9.22□□□□□ -0.93
LINC02539-202ENST00000419220 USP32Q8NFA0 1604 aa9.22□□□□□ -0.93
LINC02539-202ENST00000419220 TOPAZ1Q8N9V7 1692 aa9.22□□□□□ -0.93
LINC02539-202ENST00000419220 PNPLA6Q8IY17 1366 aa9.22□□□□□ -0.93
LINC02539-202ENST00000419220 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
LINC02539-202ENST00000419220 KCNK17Q96T54 332 aa9.21□□□□□ -0.94
LINC02539-202ENST00000419220 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.94
LINC02539-202ENST00000419220 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
LINC02539-202ENST00000419220 ANKRD36BQ8N2N9 1353 aa9.21□□□□□ -0.94
LINC02539-202ENST00000419220 DISP3Q9P2K9 1392 aa9.21□□□□□ -0.94
LINC02539-202ENST00000419220 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 COG3Q96JB2 828 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 C8orf37Q96NL8 207 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 KNSTRNQ9Y448 316 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 USP6P35125 1406 aa9.2□□□□□ -0.94
LINC02539-202ENST00000419220 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
LINC02539-202ENST00000419220 SEMA3EO15041 775 aa9.19□□□□□ -0.94
LINC02539-202ENST00000419220 LAPTM4AQ15012 233 aa9.19□□□□□ -0.94
LINC02539-202ENST00000419220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC02539-202ENST00000419220 SLC4A5Q9BY07 1137 aa9.19□□□□□ -0.94
LINC02539-202ENST00000419220 GPHNQ9NQX3 736 aaPredicted RBP9.19□□□□□ -0.94
LINC02539-202ENST00000419220 CGNL1Q0VF96 1302 aa9.19□□□□□ -0.94
LINC02539-202ENST00000419220 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
LINC02539-202ENST00000419220 TBC1D12O60347 775 aa9.18□□□□□ -0.94
LINC02539-202ENST00000419220 EVA1CP58658 441 aa9.18□□□□□ -0.94
LINC02539-202ENST00000419220 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
LINC02539-202ENST00000419220 CPSF1Q10570 1443 aaKnown RBP9.18□□□□□ -0.94
LINC02539-202ENST00000419220 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
LINC02539-202ENST00000419220 PRDM11Q9NQV5 511 aa9.18□□□□□ -0.94
LINC02539-202ENST00000419220 GCP02774 474 aa9.17□□□□□ -0.94
LINC02539-202ENST00000419220 USP21Q9UK80 565 aa9.17□□□□□ -0.94
LINC02539-202ENST00000419220 TRPC5Q9UL62 973 aaPredicted RBP9.17□□□□□ -0.94
LINC02539-202ENST00000419220 A0A1W2PP64 1363 aa9.16□□□□□ -0.94
LINC02539-202ENST00000419220 DSG2Q14126 1118 aa9.16□□□□□ -0.94
LINC02539-202ENST00000419220 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
LINC02539-202ENST00000419220 TRPM3Q9HCF6 1732 aaPredicted RBP9.16□□□□□ -0.94
LINC02539-202ENST00000419220 MED1Q15648 1581 aaPredicted RBP9.16□□□□□ -0.94
LINC02539-202ENST00000419220 AFF2P51816 1311 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 MON2Q7Z3U7 1717 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 MARF1Q9Y4F3 1742 aaKnown RBP9.15□□□□□ -0.94
LINC02539-202ENST00000419220 RXRBP28702 533 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 WNT2BQ93097 391 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
LINC02539-202ENST00000419220 PANK3Q9H999 370 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
LINC02539-202ENST00000419220 ALS2Q96Q42 1657 aa9.15□□□□□ -0.94
LINC02539-202ENST00000419220 NSD2O96028 1365 aa9.14□□□□□ -0.95
LINC02539-202ENST00000419220 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
LINC02539-202ENST00000419220 ZC3H6P61129 1189 aaKnown RBP9.14□□□□□ -0.95
LINC02539-202ENST00000419220 CAMK2BQ13554 666 aa9.14□□□□□ -0.95
LINC02539-202ENST00000419220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC02539-202ENST00000419220 UNC5CLQ8IV45 518 aa9.14□□□□□ -0.95
LINC02539-202ENST00000419220 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms