RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MEIS3Q99687 375 aa18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 USP26Q9BXU7 913 aa18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 FOXD4L5Q5VV16 416 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 CAVIN1Q6NZI2 390 aaKnown RBP18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 FOXD4L4Q8WXT5 416 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 ATP7BP35670 1465 aa18.69■□□□□ 0.58
SEMA3B-203ENST00000419007 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-203ENST00000419007 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
SEMA3B-203ENST00000419007 CEP85Q6P2H3 762 aa18.68■□□□□ 0.58
SEMA3B-203ENST00000419007 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
SEMA3B-203ENST00000419007 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
SEMA3B-203ENST00000419007 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
SEMA3B-203ENST00000419007 ZGPATQ8N5A5 531 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-203ENST00000419007 ST18O60284 1047 aa18.66■□□□□ 0.58
SEMA3B-203ENST00000419007 NUCB2P80303 420 aa18.66■□□□□ 0.58
SEMA3B-203ENST00000419007 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-203ENST00000419007 MSH6P52701 1360 aa18.66■□□□□ 0.58
SEMA3B-203ENST00000419007 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-203ENST00000419007 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-203ENST00000419007 F6X3S4 739 aa18.64■□□□□ 0.58
SEMA3B-203ENST00000419007 PLEKHG5O94827 1062 aa18.64■□□□□ 0.58
SEMA3B-203ENST00000419007 PRPF40AO75400 957 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-203ENST00000419007 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-203ENST00000419007 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
SEMA3B-203ENST00000419007 CHAMP1Q96JM3 812 aa18.64■□□□□ 0.57
SEMA3B-203ENST00000419007 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-203ENST00000419007 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
SEMA3B-203ENST00000419007 NOL8Q76FK4 1167 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-203ENST00000419007 REC8O95072 547 aa18.62■□□□□ 0.57
SEMA3B-203ENST00000419007 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
SEMA3B-203ENST00000419007 METP08581 1390 aa18.62■□□□□ 0.57
SEMA3B-203ENST00000419007 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
SEMA3B-203ENST00000419007 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
SEMA3B-203ENST00000419007 CPS1P31327 1500 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 CHL1O00533 1208 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 ATP10DQ9P241 1426 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 HMMRO75330 724 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 ZSCAN23Q3MJ62 389 aa18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
SEMA3B-203ENST00000419007 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 ERC2O15083 957 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 FOXO3O43524 673 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 NEK4P51957 841 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 G2E3Q7L622 706 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 LMBRD1Q9NUN5 540 aa18.6■□□□□ 0.57
SEMA3B-203ENST00000419007 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 CLEC17AQ6ZS10 378 aa18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 A2ML1A8K2U0 1454 aa18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
SEMA3B-203ENST00000419007 CWC22Q9HCG8 908 aaKnown RBP18.58■□□□□ 0.56
SEMA3B-203ENST00000419007 PTPRCP08575 1304 aa18.58■□□□□ 0.56
SEMA3B-203ENST00000419007 AGLP35573 1532 aa18.58■□□□□ 0.56
SEMA3B-203ENST00000419007 FOXD4L6Q3SYB3 417 aaPredicted RBP18.57■□□□□ 0.56
SEMA3B-203ENST00000419007 FOXD4L3Q6VB84 417 aaPredicted RBP18.57■□□□□ 0.56
SEMA3B-203ENST00000419007 PRR36Q9H6K5 1346 aa18.57■□□□□ 0.56
SEMA3B-203ENST00000419007 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
SEMA3B-203ENST00000419007 TRIM6-TRIM34B2RNG4 842 aa18.56■□□□□ 0.56
SEMA3B-203ENST00000419007 PDE1AP54750 535 aa18.56■□□□□ 0.56
SEMA3B-203ENST00000419007 RGS12O14924 1447 aa18.56■□□□□ 0.56
SEMA3B-203ENST00000419007 PRIM1P49642 420 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-203ENST00000419007 ZSCAN30Q86W11 494 aa18.56■□□□□ 0.56
SEMA3B-203ENST00000419007 CYP2E1P05181 493 aaPredicted RBP18.55■□□□□ 0.56
SEMA3B-203ENST00000419007 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
SEMA3B-203ENST00000419007 RBSNQ9H1K0 784 aa18.55■□□□□ 0.56
SEMA3B-203ENST00000419007 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
SEMA3B-203ENST00000419007 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 GPT2Q8TD30 523 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 ANO2Q9NQ90 1003 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 ZDHHC9Q9Y397 364 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 ACEP12821 1306 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 ZNF445P59923 1031 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
SEMA3B-203ENST00000419007 STK31Q9BXU1 1019 aa18.53■□□□□ 0.56
SEMA3B-203ENST00000419007 SYCE3A1L190 88 aa18.53■□□□□ 0.56
SEMA3B-203ENST00000419007 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
SEMA3B-203ENST00000419007 GNAI2P04899 355 aa18.52■□□□□ 0.56
SEMA3B-203ENST00000419007 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
SEMA3B-203ENST00000419007 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.56
SEMA3B-203ENST00000419007 RNF214Q8ND24 703 aa18.52■□□□□ 0.56
SEMA3B-203ENST00000419007 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.56
SEMA3B-203ENST00000419007 KIAA0232Q92628 1395 aa18.52■□□□□ 0.55
SEMA3B-203ENST00000419007 CCT4P50991 539 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-203ENST00000419007 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
SEMA3B-203ENST00000419007 GLIPR1L2Q4G1C9 344 aa18.51■□□□□ 0.55
SEMA3B-203ENST00000419007 TNRQ92752 1358 aa18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 UPF3BQ9BZI7 483 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 TMEM63CQ9P1W3 806 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms