RNA–Protein interactions for RNA: ENST00000418865.6

CCNL2-204, Transcript of cyclin L2, humanhuman

TSL 1 (best)

Gene CCNL2, Length 3,082 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2-204ENST00000418865 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
CCNL2-204ENST00000418865 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
CCNL2-204ENST00000418865 CT47B1P0C2W7 299 aaPredicted RBP13.13□□□□□ -0.31
CCNL2-204ENST00000418865 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
CCNL2-204ENST00000418865 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
CCNL2-204ENST00000418865 TSC1Q92574 1164 aa13.13□□□□□ -0.31
CCNL2-204ENST00000418865 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
CCNL2-204ENST00000418865 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
CCNL2-204ENST00000418865 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
CCNL2-204ENST00000418865 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
CCNL2-204ENST00000418865 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
CCNL2-204ENST00000418865 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
CCNL2-204ENST00000418865 PIK3R4Q99570 1358 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
CCNL2-204ENST00000418865 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
CCNL2-204ENST00000418865 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
CCNL2-204ENST00000418865 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
CCNL2-204ENST00000418865 RLBP1P12271 317 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
CCNL2-204ENST00000418865 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
CCNL2-204ENST00000418865 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 CSPP1Q1MSJ5 1256 aa13.09□□□□□ -0.31
CCNL2-204ENST00000418865 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
CCNL2-204ENST00000418865 IRX3P78415 501 aaPredicted RBP13.08□□□□□ -0.32
CCNL2-204ENST00000418865 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
CCNL2-204ENST00000418865 RWDD1Q9H446 243 aaPredicted RBP13.08□□□□□ -0.32
CCNL2-204ENST00000418865 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
CCNL2-204ENST00000418865 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
CCNL2-204ENST00000418865 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 KCNJ4P48050 445 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 IL16Q14005 1332 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
CCNL2-204ENST00000418865 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
CCNL2-204ENST00000418865 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 USP6P35125 1406 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
CCNL2-204ENST00000418865 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
CCNL2-204ENST00000418865 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
CCNL2-204ENST00000418865 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
CCNL2-204ENST00000418865 ZNF500O60304 480 aaPredicted RBP13.06□□□□□ -0.32
CCNL2-204ENST00000418865 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
CCNL2-204ENST00000418865 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
CCNL2-204ENST00000418865 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
CCNL2-204ENST00000418865 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
CCNL2-204ENST00000418865 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
CCNL2-204ENST00000418865 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
CCNL2-204ENST00000418865 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
CCNL2-204ENST00000418865 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
CCNL2-204ENST00000418865 IRX5P78411 483 aaPredicted RBP13.04□□□□□ -0.32
CCNL2-204ENST00000418865 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
CCNL2-204ENST00000418865 KCNG1Q9UIX4 513 aa13.04□□□□□ -0.32
CCNL2-204ENST00000418865 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
CCNL2-204ENST00000418865 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
CCNL2-204ENST00000418865 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
CCNL2-204ENST00000418865 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
CCNL2-204ENST00000418865 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
CCNL2-204ENST00000418865 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
CCNL2-204ENST00000418865 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
CCNL2-204ENST00000418865 SLC26A8Q96RN1 970 aa13.03□□□□□ -0.32
CCNL2-204ENST00000418865 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
CCNL2-204ENST00000418865 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
CCNL2-204ENST00000418865 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.32
CCNL2-204ENST00000418865 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.32
CCNL2-204ENST00000418865 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
CCNL2-204ENST00000418865 NME9Q86XW9 330 aa13.02□□□□□ -0.33
CCNL2-204ENST00000418865 ZBTB9Q96C00 473 aa13.02□□□□□ -0.33
CCNL2-204ENST00000418865 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.33
CCNL2-204ENST00000418865 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
CCNL2-204ENST00000418865 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
CCNL2-204ENST00000418865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
CCNL2-204ENST00000418865 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 GTF3C5Q9Y5Q8 519 aaPredicted RBP13□□□□□ -0.33
CCNL2-204ENST00000418865 FCHSD2O94868 740 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
CCNL2-204ENST00000418865 TRIM27P14373 513 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
CCNL2-204ENST00000418865 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 RGS22Q8NE09 1264 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
CCNL2-204ENST00000418865 ACEP12821 1306 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 TTC21BQ7Z4L5 1316 aa13□□□□□ -0.33
CCNL2-204ENST00000418865 HS1BP3Q53T59 392 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms