RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 RIPK4P57078 832 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 FNBP4Q8N3X1 1017 aaPredicted RBP17.72■□□□□ 0.43
LTA-213ENST00000418386 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 BCL9LQ86UU0 1499 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
LTA-213ENST00000418386 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
LTA-213ENST00000418386 DISP2A7MBM2 1401 aa17.71■□□□□ 0.43
LTA-213ENST00000418386 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
LTA-213ENST00000418386 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
LTA-213ENST00000418386 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
LTA-213ENST00000418386 NGLY1Q96IV0 654 aa17.71■□□□□ 0.43
LTA-213ENST00000418386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
LTA-213ENST00000418386 LRRC37A3O60309 1634 aa17.7■□□□□ 0.42
LTA-213ENST00000418386 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
LTA-213ENST00000418386 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
LTA-213ENST00000418386 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
LTA-213ENST00000418386 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 IL16Q14005 1332 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
LTA-213ENST00000418386 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
LTA-213ENST00000418386 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
LTA-213ENST00000418386 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
LTA-213ENST00000418386 IL2RBP14784 551 aa17.67■□□□□ 0.42
LTA-213ENST00000418386 THRAP3Q9Y2W1 955 aaKnown RBP17.67■□□□□ 0.42
LTA-213ENST00000418386 VPS72Q15906 364 aa17.66■□□□□ 0.42
LTA-213ENST00000418386 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
LTA-213ENST00000418386 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
LTA-213ENST00000418386 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
LTA-213ENST00000418386 E9PSI1 815 aa17.64■□□□□ 0.42
LTA-213ENST00000418386 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.42
LTA-213ENST00000418386 SLFN5Q08AF3 891 aa17.64■□□□□ 0.42
LTA-213ENST00000418386 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.42
LTA-213ENST00000418386 USP21Q9UK80 565 aa17.64■□□□□ 0.42
LTA-213ENST00000418386 AFF2P51816 1311 aa17.64■□□□□ 0.41
LTA-213ENST00000418386 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
LTA-213ENST00000418386 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
LTA-213ENST00000418386 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
LTA-213ENST00000418386 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
LTA-213ENST00000418386 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 ATRNO75882 1429 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
LTA-213ENST00000418386 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
LTA-213ENST00000418386 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
LTA-213ENST00000418386 PCDH11XQ9BZA7 1347 aa17.62■□□□□ 0.41
LTA-213ENST00000418386 PCDH11YQ9BZA8 1340 aa17.62■□□□□ 0.41
LTA-213ENST00000418386 PHKG2P15735 406 aa17.61■□□□□ 0.41
LTA-213ENST00000418386 DUSP27Q5VZP5 1158 aa17.61■□□□□ 0.41
LTA-213ENST00000418386 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
LTA-213ENST00000418386 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
LTA-213ENST00000418386 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
LTA-213ENST00000418386 GLI3P10071 1580 aa17.61■□□□□ 0.41
LTA-213ENST00000418386 CYP27B1O15528 508 aa17.6■□□□□ 0.41
LTA-213ENST00000418386 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
LTA-213ENST00000418386 MCM10Q7L590 875 aa17.6■□□□□ 0.41
LTA-213ENST00000418386 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
LTA-213ENST00000418386 THSD7AQ9UPZ6 1657 aa17.6■□□□□ 0.41
LTA-213ENST00000418386 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
LTA-213ENST00000418386 ZNF853P0CG23 659 aa17.59■□□□□ 0.41
LTA-213ENST00000418386 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
LTA-213ENST00000418386 MYH16Q9H6N6 1097 aa17.59■□□□□ 0.41
LTA-213ENST00000418386 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
LTA-213ENST00000418386 KDM6AO15550 1401 aaPredicted RBP17.59■□□□□ 0.41
LTA-213ENST00000418386 MRC1P22897 1456 aa17.59■□□□□ 0.41
LTA-213ENST00000418386 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.41
LTA-213ENST00000418386 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
LTA-213ENST00000418386 GNAI1P63096 354 aa17.57■□□□□ 0.4
LTA-213ENST00000418386 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
LTA-213ENST00000418386 TRPC5Q9UL62 973 aaPredicted RBP17.57■□□□□ 0.4
LTA-213ENST00000418386 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
LTA-213ENST00000418386 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
LTA-213ENST00000418386 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
LTA-213ENST00000418386 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
LTA-213ENST00000418386 EXOC5O00471 708 aa17.54■□□□□ 0.4
LTA-213ENST00000418386 CHL1O00533 1208 aa17.54■□□□□ 0.4
LTA-213ENST00000418386 SOCS7O14512 581 aa17.54■□□□□ 0.4
LTA-213ENST00000418386 DDB1Q16531 1140 aa17.53■□□□□ 0.4
LTA-213ENST00000418386 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
LTA-213ENST00000418386 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
LTA-213ENST00000418386 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
LTA-213ENST00000418386 TEFQ10587 303 aa17.52■□□□□ 0.4
LTA-213ENST00000418386 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
LTA-213ENST00000418386 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
LTA-213ENST00000418386 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
LTA-213ENST00000418386 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms