RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 TNNQ9UQP3 1299 aa15.83■□□□□ 0.13
BDNF-208ENST00000418212 CYP46A1Q9Y6A2 500 aa15.83■□□□□ 0.13
BDNF-208ENST00000418212 K7ELQ4 463 aaPredicted RBP15.83■□□□□ 0.12
BDNF-208ENST00000418212 KRT28Q7Z3Y7 464 aa15.83■□□□□ 0.12
BDNF-208ENST00000418212 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
BDNF-208ENST00000418212 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
BDNF-208ENST00000418212 JARID2Q92833 1246 aaPredicted RBP15.83■□□□□ 0.12
BDNF-208ENST00000418212 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.12
BDNF-208ENST00000418212 TPM3P06753 285 aa15.82■□□□□ 0.12
BDNF-208ENST00000418212 MYD88Q99836 296 aa15.82■□□□□ 0.12
BDNF-208ENST00000418212 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
BDNF-208ENST00000418212 NASPP49321 788 aaPredicted RBP15.82■□□□□ 0.12
BDNF-208ENST00000418212 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
BDNF-208ENST00000418212 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
BDNF-208ENST00000418212 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 MCM2P49736 904 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 A2MP01023 1474 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 HIP1O00291 1037 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 IDH1O75874 414 aaKnown RBP15.81■□□□□ 0.12
BDNF-208ENST00000418212 MX1P20591 662 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
BDNF-208ENST00000418212 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 KIF1BPQ96EK5 621 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 POLKQ9UBT6 870 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 ATP5J2-PTCD1G3V325 749 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 DNAAF4Q8WXU2 420 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
BDNF-208ENST00000418212 PDCP20941 246 aa15.8■□□□□ 0.12
BDNF-208ENST00000418212 PPP1R1BQ9UD71 204 aaPredicted RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 ABCF2Q9UG63 623 aa15.79■□□□□ 0.12
BDNF-208ENST00000418212 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
BDNF-208ENST00000418212 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
BDNF-208ENST00000418212 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 SART3Q15020 963 aaKnown RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 TSR1Q2NL82 804 aaKnown RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 PCMTD1Q96MG8 357 aaPredicted RBP15.79■□□□□ 0.12
BDNF-208ENST00000418212 TNRQ92752 1358 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 GPTP24298 496 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 AMOTQ4VCS5 1084 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 LARP1BQ659C4 914 aaKnown RBP15.78■□□□□ 0.12
BDNF-208ENST00000418212 DBF4Q9UBU7 674 aaPredicted RBP15.78■□□□□ 0.12
BDNF-208ENST00000418212 A0A087WZG4 1122 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 MRE11P49959 708 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 C8orf58Q8NAV2 365 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 NOC3LQ8WTT2 800 aaKnown RBP15.78■□□□□ 0.12
BDNF-208ENST00000418212 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
BDNF-208ENST00000418212 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
BDNF-208ENST00000418212 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
BDNF-208ENST00000418212 STARD3NLO95772 234 aa15.77■□□□□ 0.12
BDNF-208ENST00000418212 IKQ13123 557 aaPredicted RBP15.77■□□□□ 0.12
BDNF-208ENST00000418212 MEIS3Q99687 375 aa15.77■□□□□ 0.12
BDNF-208ENST00000418212 DDX11Q96FC9 970 aa15.77■□□□□ 0.11
BDNF-208ENST00000418212 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
BDNF-208ENST00000418212 ATP2B2Q01814 1243 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 GLRX3O76003 335 aaKnown RBP15.76■□□□□ 0.11
BDNF-208ENST00000418212 MCM4P33991 863 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 HOMER1Q86YM7 354 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 ANKRD24Q8TF21 1146 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
BDNF-208ENST00000418212 MBD3O95983 291 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 METTL24Q5JXM2 366 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 UBE3BQ7Z3V4 1068 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 LRRC59Q96AG4 307 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.75■□□□□ 0.11
BDNF-208ENST00000418212 RALGAPBQ86X10 1494 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 TPM1P09493 284 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 RLBP1P12271 317 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 STK38Q15208 465 aa15.75■□□□□ 0.11
BDNF-208ENST00000418212 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
BDNF-208ENST00000418212 HSPA2P54652 639 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 ANKRD36BQ8N2N9 1353 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
BDNF-208ENST00000418212 PDRG1Q9NUG6 133 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 LRP2BPQ9P2M1 347 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 TCEAL9Q9UHQ7 104 aa15.74■□□□□ 0.11
BDNF-208ENST00000418212 PPP1R42Q7Z4L9 355 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 MAP3K2Q9Y2U5 619 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
BDNF-208ENST00000418212 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 UHRF1BP1LA0JNW5 1464 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 KCNA6P17658 529 aa15.73■□□□□ 0.11
BDNF-208ENST00000418212 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
BDNF-208ENST00000418212 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms