RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 MRE11P49959 708 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 CEP85Q6P2H3 762 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 C14orf37Q86TY3 774 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 MEIS3Q99687 375 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 REC8O95072 547 aa14.43□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 CCT4P50991 539 aaKnown RBP14.42□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 ST18O60284 1047 aa14.42□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 GSPT1P15170 499 aaKnown RBP14.42□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 AMOTL2Q9Y2J4 779 aa14.42□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 NLRP6P59044 892 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 LTKP29376 864 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 MSH6P52701 1360 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 MTHFSDQ2M296 383 aaKnown RBP14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 FOXO3O43524 673 aa14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 USP6P35125 1406 aa14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 F6X3S4 739 aa14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 GNAI2P04899 355 aa14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 CEBPAP49715 358 aaPredicted RBP14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 ANP32BQ92688 251 aaKnown RBP14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 ISY1Q9ULR0 285 aaKnown RBP14.4□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 KIF2CQ99661 725 aa14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 FLT4P35916 1363 aa14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 SDSP20132 328 aa14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 LTV1Q96GA3 475 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 OTUD7AQ8TE49 926 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ANO8Q9HCE9 1232 aaPredicted RBP14.39□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 RTL1A6NKG5 1358 aa14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 CD2BP2O95400 341 aaKnown RBP14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NUCB2P80303 420 aa14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 GNAI3P08754 354 aa14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NUTM2GQ5VZR2 741 aa14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 GRPEL1Q9HAV7 217 aa14.38□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ERC2O15083 957 aa14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 EYA1Q99502 592 aa14.37□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 OVOS2A0A0J9YW53 1432 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 OVOS2Q6IE36 1432 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 MCCP23508 829 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 SSFA2P28290 1259 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 TRIM6-TRIM34B2RNG4 842 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 G2E3Q7L622 706 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 NRXN3Q9Y4C0 1643 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 SETD1AO15047 1707 aaKnown RBP14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 DDIT3P35638 169 aa14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 FLIIQ13045 1269 aa14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 MON2Q7Z3U7 1717 aa14.34□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
CSPG4P3Y-201ENST00000418188 ATP10DQ9P241 1426 aa14.33□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 PDE1AP54750 535 aa14.33□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 C3P01024 1663 aa14.32□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 MCTP1Q6DN14 999 aa14.32□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 DLG5Q8TDM6 1919 aa14.32□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 CRB1P82279 1406 aa14.32□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 UBTFL1P0CB47 393 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 IGSF1Q8N6C5 1336 aa14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 NEK4P51957 841 aa14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 ANO2Q9NQ90 1003 aa14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 MX1P20591 662 aa14.3□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 CHMP4AQ9BY43 222 aa14.3□□□□□ -0.12
CSPG4P3Y-201ENST00000418188 RGS12O14924 1447 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms