RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MAP3K7O43318 606 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 TSPY4P0CV99 314 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 TSPY10P0CW01 314 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 FAM196AQ6ZSG2 479 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 MAP3K5Q99683 1374 aa8.55□□□□□ -1.04
ECHDC1-206ENST00000417628 TNS2Q63HR2 1409 aa8.54□□□□□ -1.04
ECHDC1-206ENST00000417628 THSD7AQ9UPZ6 1657 aa8.54□□□□□ -1.04
ECHDC1-206ENST00000417628 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
ECHDC1-206ENST00000417628 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
ECHDC1-206ENST00000417628 EEA1Q15075 1411 aa8.54□□□□□ -1.04
ECHDC1-206ENST00000417628 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 GCC2Q8IWJ2 1684 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 LMTK2Q8IWU2 1503 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
ECHDC1-206ENST00000417628 KANK1Q14678 1352 aa8.52□□□□□ -1.05
ECHDC1-206ENST00000417628 UTRNP46939 3433 aa8.52□□□□□ -1.05
ECHDC1-206ENST00000417628 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-206ENST00000417628 TMUB1Q9BVT8 246 aa8.52□□□□□ -1.05
ECHDC1-206ENST00000417628 FOSBP53539 338 aa8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 PDGFDQ9GZP0 370 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 MYO5BQ9ULV0 1848 aa8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 NRAPQ86VF7 1730 aa8.51□□□□□ -1.05
ECHDC1-206ENST00000417628 POTEB2H3BUK9 544 aa8.5□□□□□ -1.05
ECHDC1-206ENST00000417628 MS4A1P11836 297 aa8.5□□□□□ -1.05
ECHDC1-206ENST00000417628 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
ECHDC1-206ENST00000417628 FAM161AQ3B820 660 aa8.5□□□□□ -1.05
ECHDC1-206ENST00000417628 KLRG1Q96E93 195 aa8.5□□□□□ -1.05
ECHDC1-206ENST00000417628 LRPPRCP42704 1394 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-206ENST00000417628 ERBINQ96RT1 1412 aa8.49□□□□□ -1.05
ECHDC1-206ENST00000417628 HOXB3P14651 431 aaPredicted RBP8.49□□□□□ -1.05
ECHDC1-206ENST00000417628 KHSRPQ92945 711 aaKnown RBP eCLIP8.49□□□□□ -1.052e-12■■■□□ 17
ECHDC1-206ENST00000417628 ARXQ96QS3 562 aa8.49□□□□□ -1.05
ECHDC1-206ENST00000417628 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 WDR90Q96KV7 1748 aa8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 RGPD3A6NKT7 1758 aaPredicted RBP8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 RGPD4Q7Z3J3 1758 aa8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 ADCY9O60503 1353 aa8.48□□□□□ -1.05
ECHDC1-206ENST00000417628 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
ECHDC1-206ENST00000417628 SPATA31A5Q5VU36 1347 aa8.47□□□□□ -1.05
ECHDC1-206ENST00000417628 SPATA31A3Q5VYP0 1347 aa8.47□□□□□ -1.05
ECHDC1-206ENST00000417628 SPATA31A7Q8IWB4 1347 aa8.47□□□□□ -1.05
ECHDC1-206ENST00000417628 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
ECHDC1-206ENST00000417628 CEP162Q5TB80 1403 aa8.46□□□□□ -1.05
ECHDC1-206ENST00000417628 FOXO3O43524 673 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 NUDT7P0C024 238 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 MDM2Q00987 491 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 ARSIQ5FYB1 569 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 METP08581 1390 aa8.46□□□□□ -1.06
ECHDC1-206ENST00000417628 GRIN3BO60391 1043 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 UBTFP17480 764 aaKnown RBP8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 PADI6Q6TGC4 694 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 TTC13Q8NBP0 860 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 ABCA3Q99758 1704 aa8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
ECHDC1-206ENST00000417628 CLCN1P35523 988 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 GPR153Q6NV75 609 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 SCUBE2Q9NQ36 999 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 KIF15Q9NS87 1388 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
ECHDC1-206ENST00000417628 HSPA1AP0DMV8 641 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 HSPA1BP0DMV9 641 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 METTL3Q86U44 580 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 TNS3Q68CZ2 1445 aa8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 CDC42BPGQ6DT37 1551 aa8.43□□□□□ -1.06
ECHDC1-206ENST00000417628 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-206ENST00000417628 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
ECHDC1-206ENST00000417628 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
ECHDC1-206ENST00000417628 ZSWIM6Q9HCJ5 1215 aa8.42□□□□□ -1.06
ECHDC1-206ENST00000417628 STK32BQ9NY57 414 aa8.42□□□□□ -1.06
ECHDC1-206ENST00000417628 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
ECHDC1-206ENST00000417628 OATP04181 439 aa8.41□□□□□ -1.06
ECHDC1-206ENST00000417628 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
ECHDC1-206ENST00000417628 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
ECHDC1-206ENST00000417628 PLSCR1O15162 318 aa8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 TOMM70O94826 608 aa8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 HTRA3P83110 453 aa8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-206ENST00000417628 PRSS12P56730 875 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms