RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
TRAPPC13-203ENST00000415825 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
TRAPPC13-203ENST00000415825 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
TRAPPC13-203ENST00000415825 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
TRAPPC13-203ENST00000415825 ERVH48-1M5A8F1 160 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 RHOQP17081 205 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 SLC27A3Q5K4L6 730 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 PPP2R2DQ66LE6 453 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
TRAPPC13-203ENST00000415825 MEN1O00255 615 aa8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 MX2P20592 715 aa8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 RNF144AP50876 292 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 GAS6Q14393 721 aa8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 XP32Q5T750 250 aa8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 GAS2L1Q99501 681 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
TRAPPC13-203ENST00000415825 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 GPR25O00155 361 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 AP1G2O75843 785 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 GPC1P35052 558 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
TRAPPC13-203ENST00000415825 PIK3R2O00459 728 aa8.06□□□□□ -1.12
TRAPPC13-203ENST00000415825 ALYREFQ86V81 257 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-203ENST00000415825 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
TRAPPC13-203ENST00000415825 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-203ENST00000415825 CUEDC1Q9NWM3 386 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC13-203ENST00000415825 MAP2K3P46734 347 aa8.05□□□□□ -1.12
TRAPPC13-203ENST00000415825 MKL2Q9ULH7 1088 aa8.05□□□□□ -1.12
TRAPPC13-203ENST00000415825 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
TRAPPC13-203ENST00000415825 RRAGCQ9HB90 399 aa8.04□□□□□ -1.12
TRAPPC13-203ENST00000415825 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
TRAPPC13-203ENST00000415825 LILRA1O75019 489 aa8.03□□□□□ -1.12
TRAPPC13-203ENST00000415825 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-203ENST00000415825 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
TRAPPC13-203ENST00000415825 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
TRAPPC13-203ENST00000415825 DBN1Q16643 649 aa8.02□□□□□ -1.13
TRAPPC13-203ENST00000415825 RNF20Q5VTR2 975 aa8.02□□□□□ -1.13
TRAPPC13-203ENST00000415825 ACDQ96AP0 544 aa8.02□□□□□ -1.13
TRAPPC13-203ENST00000415825 OXCT2Q9BYC2 517 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC13-203ENST00000415825 NUCKS1Q9H1E3 243 aaKnown RBP8.01□□□□□ -1.13
TRAPPC13-203ENST00000415825 ESPNB1AK53 854 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 OIP5O43482 229 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 AMPD1P23109 780 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 POU4F2Q12837 409 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 TIMMDC1Q9NPL8 285 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
TRAPPC13-203ENST00000415825 A0A1W2PRU2 124 aa7.99□□□□□ -1.13
TRAPPC13-203ENST00000415825 PROCP04070 461 aa7.99□□□□□ -1.13
TRAPPC13-203ENST00000415825 GDF2Q9UK05 429 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC13-203ENST00000415825 F11P03951 625 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 BAG6P46379 1132 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 WDR44Q5JSH3 913 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
TRAPPC13-203ENST00000415825 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
TRAPPC13-203ENST00000415825 NBPF10Q6P3W6 841 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-203ENST00000415825 PGBD3Q8N328 593 aa7.97□□□□□ -1.13
TRAPPC13-203ENST00000415825 NBPF15Q8N660 670 aa7.97□□□□□ -1.13
TRAPPC13-203ENST00000415825 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC13-203ENST00000415825 KDF1Q8NAX2 398 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC13-203ENST00000415825 CFHR5Q9BXR6 569 aa7.96□□□□□ -1.14
TRAPPC13-203ENST00000415825 WASLO00401 505 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-203ENST00000415825 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
TRAPPC13-203ENST00000415825 GRIN2CQ14957 1233 aa7.95□□□□□ -1.14
TRAPPC13-203ENST00000415825 GOLGA6L1Q8N7Z2 621 aa7.95□□□□□ -1.14
TRAPPC13-203ENST00000415825 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-203ENST00000415825 CLN3Q13286 438 aa7.94□□□□□ -1.14
TRAPPC13-203ENST00000415825 ZBBXA8MT70 800 aa7.93□□□□□ -1.14
TRAPPC13-203ENST00000415825 FURINP09958 794 aa7.93□□□□□ -1.14
TRAPPC13-203ENST00000415825 Q8N3U1 123 aa7.93□□□□□ -1.14
TRAPPC13-203ENST00000415825 EDARADDQ8WWZ3 215 aa7.93□□□□□ -1.14
TRAPPC13-203ENST00000415825 NOP53Q9NZM5 478 aaKnown RBP7.93□□□□□ -1.14
TRAPPC13-203ENST00000415825 SPATA31C2B4DYI2 1134 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 GIGYF1O75420 1035 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 BMP4P12644 408 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 EFHC2Q5JST6 749 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 GNASQ5JWF2 1037 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 GPAMQ9HCL2 828 aa7.92□□□□□ -1.14
TRAPPC13-203ENST00000415825 A0A1B0GTH6 734 aa7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 KRBA1A5PL33 1030 aa7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 LBRQ14739 615 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
TRAPPC13-203ENST00000415825 GNB5O14775 395 aa7.9□□□□□ -1.14
TRAPPC13-203ENST00000415825 MYCP01106 439 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-203ENST00000415825 ITGB2P05107 769 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms