RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
CDC42EP1-202ENST00000415670 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
CDC42EP1-202ENST00000415670 POLD1P28340 1107 aa23.24■■□□□ 1.31
CDC42EP1-202ENST00000415670 MSL1Q68DK7 614 aa23.24■■□□□ 1.31
CDC42EP1-202ENST00000415670 NSD2O96028 1365 aa23.24■■□□□ 1.31
CDC42EP1-202ENST00000415670 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
CDC42EP1-202ENST00000415670 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
CDC42EP1-202ENST00000415670 COL23A1Q86Y22 540 aaPredicted RBP23.23■■□□□ 1.31
CDC42EP1-202ENST00000415670 SLC16A10Q8TF71 515 aa23.23■■□□□ 1.31
CDC42EP1-202ENST00000415670 USP54Q70EL1 1684 aa23.22■■□□□ 1.31
CDC42EP1-202ENST00000415670 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
CDC42EP1-202ENST00000415670 MSH5O43196 834 aa23.2■■□□□ 1.3
CDC42EP1-202ENST00000415670 IP6K1Q92551 441 aa23.2■■□□□ 1.3
CDC42EP1-202ENST00000415670 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
CDC42EP1-202ENST00000415670 SMIM5Q71RC9 77 aa23.19■■□□□ 1.3
CDC42EP1-202ENST00000415670 USP47Q96K76 1375 aa23.18■■□□□ 1.3
CDC42EP1-202ENST00000415670 LY75O60449 1722 aa23.17■■□□□ 1.3
CDC42EP1-202ENST00000415670 WWC3Q9ULE0 1092 aa23.17■■□□□ 1.3
CDC42EP1-202ENST00000415670 CCNL1Q9UK58 526 aaPredicted RBP23.16■■□□□ 1.3
CDC42EP1-202ENST00000415670 A0A1W2PP64 1363 aa23.15■■□□□ 1.3
CDC42EP1-202ENST00000415670 ANKRD36BQ8N2N9 1353 aa23.15■■□□□ 1.3
CDC42EP1-202ENST00000415670 EIF4G2P78344 907 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDC42EP1-202ENST00000415670 USHBP1Q8N6Y0 703 aa23.15■■□□□ 1.3
CDC42EP1-202ENST00000415670 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.3
CDC42EP1-202ENST00000415670 MEGF6O75095 1541 aa23.14■■□□□ 1.3
CDC42EP1-202ENST00000415670 FAM208AQ9UK61 1670 aaKnown RBP23.14■■□□□ 1.29
CDC42EP1-202ENST00000415670 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
CDC42EP1-202ENST00000415670 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
CDC42EP1-202ENST00000415670 ZNF526Q8TF50 670 aaPredicted RBP23.14■■□□□ 1.29
CDC42EP1-202ENST00000415670 HOXC9P31274 260 aa23.13■■□□□ 1.29
CDC42EP1-202ENST00000415670 ZCRB1Q8TBF4 217 aaKnown RBP23.13■■□□□ 1.29
CDC42EP1-202ENST00000415670 ATP10DQ9P241 1426 aa23.13■■□□□ 1.29
CDC42EP1-202ENST00000415670 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
CDC42EP1-202ENST00000415670 EDC4Q6P2E9 1401 aaKnown RBP23.12■■□□□ 1.29
CDC42EP1-202ENST00000415670 NBPF6Q5VWK0 638 aa23.1■■□□□ 1.29
CDC42EP1-202ENST00000415670 NBPF4Q96M43 638 aa23.1■■□□□ 1.29
CDC42EP1-202ENST00000415670 GRIN3BO60391 1043 aa23.09■■□□□ 1.29
CDC42EP1-202ENST00000415670 ST20-MTHFSA0A0A6YYL1 179 aa23.07■■□□□ 1.28
CDC42EP1-202ENST00000415670 AMPHP49418 695 aa23.07■■□□□ 1.28
CDC42EP1-202ENST00000415670 RRS1Q15050 365 aaKnown RBP23.07■■□□□ 1.28
CDC42EP1-202ENST00000415670 TERF2IPQ9NYB0 399 aa23.06■■□□□ 1.28
CDC42EP1-202ENST00000415670 GPBP1L1Q9HC44 474 aaPredicted RBP23.03■■□□□ 1.28
CDC42EP1-202ENST00000415670 COG3Q96JB2 828 aa23.02■■□□□ 1.28
CDC42EP1-202ENST00000415670 C5P01031 1676 aa23.02■■□□□ 1.28
CDC42EP1-202ENST00000415670 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
CDC42EP1-202ENST00000415670 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
CDC42EP1-202ENST00000415670 TESK2Q96S53 571 aa23.01■■□□□ 1.27
CDC42EP1-202ENST00000415670 CD2APQ9Y5K6 639 aa23■■□□□ 1.27
CDC42EP1-202ENST00000415670 ADCY9O60503 1353 aa23■■□□□ 1.27
CDC42EP1-202ENST00000415670 PHF14O94880 888 aa22.99■■□□□ 1.27
CDC42EP1-202ENST00000415670 HSPA6P17066 643 aa22.99■■□□□ 1.27
CDC42EP1-202ENST00000415670 GGNBP2Q9H3C7 697 aa22.99■■□□□ 1.27
CDC42EP1-202ENST00000415670 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
CDC42EP1-202ENST00000415670 TOGARAM1Q9Y4F4 1720 aa22.98■■□□□ 1.27
CDC42EP1-202ENST00000415670 CYP27B1O15528 508 aa22.97■■□□□ 1.27
CDC42EP1-202ENST00000415670 PALLDQ8WX93 1383 aa22.97■■□□□ 1.27
CDC42EP1-202ENST00000415670 SLC24A1O60721 1099 aa22.96■■□□□ 1.27
CDC42EP1-202ENST00000415670 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
CDC42EP1-202ENST00000415670 FYB1O15117 783 aa22.95■■□□□ 1.26
CDC42EP1-202ENST00000415670 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
CDC42EP1-202ENST00000415670 KIF3CO14782 793 aa22.94■■□□□ 1.26
CDC42EP1-202ENST00000415670 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
CDC42EP1-202ENST00000415670 ITGB4P16144 1822 aa22.94■■□□□ 1.26
CDC42EP1-202ENST00000415670 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
CDC42EP1-202ENST00000415670 PIGBQ92521 554 aa22.93■■□□□ 1.26
CDC42EP1-202ENST00000415670 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
CDC42EP1-202ENST00000415670 TMF1P82094 1093 aa22.92■■□□□ 1.26
CDC42EP1-202ENST00000415670 LINC00116Q8NCU8 138 aa22.92■■□□□ 1.26
CDC42EP1-202ENST00000415670 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
CDC42EP1-202ENST00000415670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.91■■□□□ 1.26
CDC42EP1-202ENST00000415670 PUS7Q96PZ0 661 aaKnown RBP22.91■■□□□ 1.26
CDC42EP1-202ENST00000415670 AK7Q96M32 723 aa22.9■■□□□ 1.26
CDC42EP1-202ENST00000415670 ITPK1Q13572 414 aa22.87■■□□□ 1.25
CDC42EP1-202ENST00000415670 FLAD1Q8NFF5 587 aa22.87■■□□□ 1.25
CDC42EP1-202ENST00000415670 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
CDC42EP1-202ENST00000415670 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
CDC42EP1-202ENST00000415670 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
CDC42EP1-202ENST00000415670 MAP2P11137 1827 aaKnown RBP22.86■■□□□ 1.25
CDC42EP1-202ENST00000415670 RTL1A6NKG5 1358 aa22.86■■□□□ 1.25
CDC42EP1-202ENST00000415670 CGNL1Q0VF96 1302 aa22.85■■□□□ 1.25
CDC42EP1-202ENST00000415670 CDCA8Q53HL2 280 aa22.85■■□□□ 1.25
CDC42EP1-202ENST00000415670 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
CDC42EP1-202ENST00000415670 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
CDC42EP1-202ENST00000415670 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
CDC42EP1-202ENST00000415670 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
CDC42EP1-202ENST00000415670 DNAJC5GQ8N7S2 189 aa22.83■■□□□ 1.25
CDC42EP1-202ENST00000415670 INSRP06213 1382 aa22.83■■□□□ 1.25
CDC42EP1-202ENST00000415670 LOC102724428A0A0B4J2F2 783 aa22.82■■□□□ 1.24
CDC42EP1-202ENST00000415670 A0A0G2JLW4 131 aa22.82■■□□□ 1.24
CDC42EP1-202ENST00000415670 SIK1P57059 783 aa22.82■■□□□ 1.24
CDC42EP1-202ENST00000415670 HTRA3P83110 453 aa22.81■■□□□ 1.24
CDC42EP1-202ENST00000415670 SMARCC1Q92922 1105 aaPredicted RBP22.81■■□□□ 1.24
CDC42EP1-202ENST00000415670 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
CDC42EP1-202ENST00000415670 KIAA1551Q9HCM1 1747 aa22.8■■□□□ 1.24
CDC42EP1-202ENST00000415670 GNPATO15228 680 aa22.8■■□□□ 1.24
CDC42EP1-202ENST00000415670 MMP10P09238 476 aa22.8■■□□□ 1.24
CDC42EP1-202ENST00000415670 NMRK2Q9NPI5 230 aa22.79■■□□□ 1.24
CDC42EP1-202ENST00000415670 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
CDC42EP1-202ENST00000415670 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
CDC42EP1-202ENST00000415670 SSFA2P28290 1259 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms