RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
SIK3-203ENST00000415541 METP08581 1390 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 CREBRFQ8IUR6 639 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
SIK3-203ENST00000415541 DDIT3P35638 169 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 TET3O43151 1660 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 SYNMO15061 1565 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 PIBF1Q8WXW3 757 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 NCOA3Q9Y6Q9 1424 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 ZNF521Q96K83 1311 aa9.47□□□□□ -0.89
SIK3-203ENST00000415541 U2AF2P26368 475 aaKnown RBP eCLIP9.46□□□□□ -0.892e-6■■■□□ 16.2
SIK3-203ENST00000415541 MCTP1Q6DN14 999 aa9.46□□□□□ -0.89
SIK3-203ENST00000415541 PPIP5K1Q6PFW1 1433 aa9.46□□□□□ -0.89
SIK3-203ENST00000415541 EFCC1Q9HA90 598 aa9.46□□□□□ -0.89
SIK3-203ENST00000415541 FCHSD2O94868 740 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 EIF2S2P20042 333 aaKnown RBP9.46□□□□□ -0.9
SIK3-203ENST00000415541 TEFQ10587 303 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 HSP90AB2PQ58FF8 381 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 CLEC17AQ6ZS10 378 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 DHX37Q8IY37 1157 aaKnown RBP9.46□□□□□ -0.9
SIK3-203ENST00000415541 SYAP1Q96A49 352 aaPredicted RBP9.46□□□□□ -0.9
SIK3-203ENST00000415541 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 POLKQ9UBT6 870 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 ZNF330Q9Y3S2 320 aaPredicted RBP9.46□□□□□ -0.9
SIK3-203ENST00000415541 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 KIDINS220Q9ULH0 1771 aa9.46□□□□□ -0.9
SIK3-203ENST00000415541 GNAI1P63096 354 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
SIK3-203ENST00000415541 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 HDAC5Q9UQL6 1122 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 ERVK-7P63135 1459 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
SIK3-203ENST00000415541 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
SIK3-203ENST00000415541 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.92e-6■■■■□ 20.5
SIK3-203ENST00000415541 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
SIK3-203ENST00000415541 SSFA2P28290 1259 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 PIK3C2GO75747 1445 aa9.45□□□□□ -0.9
SIK3-203ENST00000415541 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 TSC1Q92574 1164 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
SIK3-203ENST00000415541 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
SIK3-203ENST00000415541 TPM3P06753 285 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 MCM10Q7L590 875 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 WDR63Q8IWG1 891 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 ZNF622Q969S3 477 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■□□□ 12.7
SIK3-203ENST00000415541 PHF14O94880 888 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 EVA1CP58658 441 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 CTR9Q6PD62 1173 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
SIK3-203ENST00000415541 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
SIK3-203ENST00000415541 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
SIK3-203ENST00000415541 MBD3O95983 291 aa9.43□□□□□ -0.9
SIK3-203ENST00000415541 PUS7Q96PZ0 661 aaKnown RBP9.43□□□□□ -0.9
SIK3-203ENST00000415541 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
SIK3-203ENST00000415541 GEMIN8Q9NWZ8 242 aaKnown RBP9.43□□□□□ -0.9
SIK3-203ENST00000415541 GOLGA6L6A8MZA4 724 aa9.43□□□□□ -0.9
SIK3-203ENST00000415541 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 ANKRD7Q92527 254 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 TSPY26PQ9H489 355 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 KIF1BO60333 1816 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 MYOM2P54296 1465 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 ARHGAP31Q2M1Z3 1444 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 ABCC11Q96J66 1382 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 DIP2CQ9Y2E4 1556 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 FKBP5Q13451 457 aaPredicted RBP9.42□□□□□ -0.9
SIK3-203ENST00000415541 SYCP1Q15431 976 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
SIK3-203ENST00000415541 CERS3Q8IU89 383 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
SIK3-203ENST00000415541 NSD2O96028 1365 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 ABCA6Q8N139 1617 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 OS9Q13438 667 aaPredicted RBP9.41□□□□□ -0.9
SIK3-203ENST00000415541 TERF2Q15554 542 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
SIK3-203ENST00000415541 KIF16BQ96L93 1317 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 PHACTR3Q96KR7 559 aa9.41□□□□□ -0.9
SIK3-203ENST00000415541 PPRC1Q5VV67 1664 aaKnown RBP9.41□□□□□ -0.9
SIK3-203ENST00000415541 PRPF40AO75400 957 aaKnown RBP9.4□□□□□ -0.9
SIK3-203ENST00000415541 MMP14P50281 582 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 RNF214Q8ND24 703 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
SIK3-203ENST00000415541 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms