RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 U2AF1Q01081 240 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC8-211ENST00000415409 CCDC146Q8IYE0 955 aa8.74□□□□□ -1.01
HDAC8-211ENST00000415409 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
HDAC8-211ENST00000415409 PNNQ9H307 717 aaKnown RBP8.74□□□□□ -1.01
HDAC8-211ENST00000415409 XRN1Q8IZH2 1706 aaKnown RBP8.74□□□□□ -1.01
HDAC8-211ENST00000415409 AATKQ6ZMQ8 1374 aa8.73□□□□□ -1.01
HDAC8-211ENST00000415409 USP6P35125 1406 aa8.73□□□□□ -1.01
HDAC8-211ENST00000415409 ADGRL3Q9HAR2 1447 aa8.73□□□□□ -1.01
HDAC8-211ENST00000415409 SOCS7O14512 581 aa8.73□□□□□ -1.01
HDAC8-211ENST00000415409 U2SURPO15042 1029 aaKnown RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 PPM1GO15355 546 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 POLKQ9UBT6 870 aa8.73□□□□□ -1.01
HDAC8-211ENST00000415409 SUPT16HQ9Y5B9 1047 aaKnown RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
HDAC8-211ENST00000415409 APAF1O14727 1248 aa8.72□□□□□ -1.01
HDAC8-211ENST00000415409 SLC34A2O95436 690 aa8.72□□□□□ -1.01
HDAC8-211ENST00000415409 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
HDAC8-211ENST00000415409 C19orf44Q9H6X5 657 aa8.72□□□□□ -1.01
HDAC8-211ENST00000415409 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
HDAC8-211ENST00000415409 PNPLA6Q8IY17 1366 aa8.72□□□□□ -1.01
HDAC8-211ENST00000415409 UBAP1LF5GYI3 381 aa8.71□□□□□ -1.02
HDAC8-211ENST00000415409 PTGER2P43116 358 aa8.71□□□□□ -1.02
HDAC8-211ENST00000415409 ESCO1Q5FWF5 840 aa8.71□□□□□ -1.02
HDAC8-211ENST00000415409 STRCP1A6NGW2 1772 aa8.71□□□□□ -1.02
HDAC8-211ENST00000415409 TOM1O60784 492 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 NEFMP07197 916 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 ATF3P18847 181 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
HDAC8-211ENST00000415409 PSME1Q06323 249 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 ERICH6BQ5W0A0 696 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 EMILIN1Q9Y6C2 1016 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 SSH2Q76I76 1423 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
HDAC8-211ENST00000415409 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
HDAC8-211ENST00000415409 FCHSD2O94868 740 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 TCP11L2Q8N4U5 519 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 ZNF521Q96K83 1311 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
HDAC8-211ENST00000415409 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
HDAC8-211ENST00000415409 E9PSI1 815 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 FBLN1P23142 703 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 PBX2P40425 430 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
HDAC8-211ENST00000415409 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 RCAN3Q9UKA8 241 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 TMEM94Q12767 1356 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 OVOS2A0A0J9YW53 1432 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 OVOS2Q6IE36 1432 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 NWD1Q149M9 1564 aa8.68□□□□□ -1.02
HDAC8-211ENST00000415409 COL3A1P02461 1466 aaPredicted RBP8.67□□□□□ -1.02
HDAC8-211ENST00000415409 IL13P35225 146 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 SLFN5Q08AF3 891 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 CADPS2Q86UW7 1296 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 WDR63Q8IWG1 891 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 PLPP6Q8IY26 295 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 AXIN2Q9Y2T1 843 aa8.67□□□□□ -1.02
HDAC8-211ENST00000415409 CDK12Q9NYV4 1490 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-211ENST00000415409 AMPHP49418 695 aa8.66□□□□□ -1.02
HDAC8-211ENST00000415409 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
HDAC8-211ENST00000415409 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
HDAC8-211ENST00000415409 PLEKHF1Q96S99 279 aa8.66□□□□□ -1.02
HDAC8-211ENST00000415409 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
HDAC8-211ENST00000415409 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
HDAC8-211ENST00000415409 TOPAZ1Q8N9V7 1692 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 DCCP43146 1447 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 MSH6P52701 1360 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
HDAC8-211ENST00000415409 PRKAR2BP31323 418 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 TMPOP42166 694 aaKnown RBP8.65□□□□□ -1.02
HDAC8-211ENST00000415409 FOXK1P85037 733 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 KRT28Q7Z3Y7 464 aa8.65□□□□□ -1.02
HDAC8-211ENST00000415409 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
HDAC8-211ENST00000415409 C1orf167Q5SNV9 1468 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 SBNO1A3KN83 1393 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
HDAC8-211ENST00000415409 MAP3K19Q56UN5 1328 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 FOXO3O43524 673 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 TBC1D12O60347 775 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
HDAC8-211ENST00000415409 EIF4A2Q14240 407 aaKnown RBP8.64□□□□□ -1.03
HDAC8-211ENST00000415409 NUTM2GQ5VZR2 741 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 TRMT2AQ8IZ69 625 aaKnown RBP8.64□□□□□ -1.03
HDAC8-211ENST00000415409 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 MYH16Q9H6N6 1097 aa8.64□□□□□ -1.03
HDAC8-211ENST00000415409 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
HDAC8-211ENST00000415409 MON2Q7Z3U7 1717 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 FMN2Q9NZ56 1722 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 FLT4P35916 1363 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 HMOX1P09601 288 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms