RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 ATF7IPQ6VMQ6 1270 aa17.18■□□□□ 0.34
SSR4P1-201ENST00000415143 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
SSR4P1-201ENST00000415143 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
SSR4P1-201ENST00000415143 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SSR4P1-201ENST00000415143 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
SSR4P1-201ENST00000415143 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
SSR4P1-201ENST00000415143 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
SSR4P1-201ENST00000415143 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SSR4P1-201ENST00000415143 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
SSR4P1-201ENST00000415143 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
SSR4P1-201ENST00000415143 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
SSR4P1-201ENST00000415143 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
SSR4P1-201ENST00000415143 FBLN1P23142 703 aa17.14■□□□□ 0.33
SSR4P1-201ENST00000415143 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
SSR4P1-201ENST00000415143 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
SSR4P1-201ENST00000415143 FLT4P35916 1363 aa17.14■□□□□ 0.33
SSR4P1-201ENST00000415143 SLIT2O94813 1529 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 MSH5O43196 834 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 AMPHP49418 695 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
SSR4P1-201ENST00000415143 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
SSR4P1-201ENST00000415143 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
SSR4P1-201ENST00000415143 RGPD8O14715 1765 aaPredicted RBP17.11■□□□□ 0.33
SSR4P1-201ENST00000415143 IGHDP01880 384 aa17.11■□□□□ 0.33
SSR4P1-201ENST00000415143 XPCQ01831 940 aaPredicted RBP17.11■□□□□ 0.33
SSR4P1-201ENST00000415143 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
SSR4P1-201ENST00000415143 RLBP1P12271 317 aa17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 TRIM27P14373 513 aa17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 PXDNQ92626 1479 aa17.1■□□□□ 0.33
SSR4P1-201ENST00000415143 VAMP4O75379 141 aa17.09■□□□□ 0.33
SSR4P1-201ENST00000415143 RGS3P49796 1198 aa17.09■□□□□ 0.33
SSR4P1-201ENST00000415143 NLRP6P59044 892 aa17.09■□□□□ 0.33
SSR4P1-201ENST00000415143 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
SSR4P1-201ENST00000415143 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
SSR4P1-201ENST00000415143 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
SSR4P1-201ENST00000415143 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
SSR4P1-201ENST00000415143 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.32
SSR4P1-201ENST00000415143 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
SSR4P1-201ENST00000415143 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
SSR4P1-201ENST00000415143 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 A0A0G2JS52 829 aa17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
SSR4P1-201ENST00000415143 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
SSR4P1-201ENST00000415143 MRPL50Q8N5N7 158 aaKnown RBP17.06■□□□□ 0.32
SSR4P1-201ENST00000415143 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
SSR4P1-201ENST00000415143 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 FOXO3O43524 673 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 VPS72Q15906 364 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
SSR4P1-201ENST00000415143 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
SSR4P1-201ENST00000415143 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
SSR4P1-201ENST00000415143 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
SSR4P1-201ENST00000415143 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
SSR4P1-201ENST00000415143 CHL1O00533 1208 aa17.03■□□□□ 0.32
SSR4P1-201ENST00000415143 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
SSR4P1-201ENST00000415143 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
SSR4P1-201ENST00000415143 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
SSR4P1-201ENST00000415143 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 ZBTB40Q9NUA8 1239 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
SSR4P1-201ENST00000415143 KDRP35968 1356 aa17.02■□□□□ 0.31
SSR4P1-201ENST00000415143 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 SOX12O15370 315 aa17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 PSME1Q06323 249 aa17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
SSR4P1-201ENST00000415143 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
SSR4P1-201ENST00000415143 FAM182BQ5T319 152 aa17■□□□□ 0.31
SSR4P1-201ENST00000415143 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
SSR4P1-201ENST00000415143 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
SSR4P1-201ENST00000415143 HOXC9P31274 260 aa16.99■□□□□ 0.31
SSR4P1-201ENST00000415143 PIK3C2AO00443 1686 aa16.99■□□□□ 0.31
SSR4P1-201ENST00000415143 PTPRCP08575 1304 aa16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
SSR4P1-201ENST00000415143 GCC1Q96CN9 775 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms