RNA–Protein interactions for RNA: ENST00000414510.5

PTPA-210, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-210	ENST00000414510	CAMKK2	Q96RR4	588 aa		33.19	■■■□□ 2.9
PTPA-210	ENST00000414510	ACSBG1	Q96GR2	724 aa		33.18	■■■□□ 2.9
PTPA-210	ENST00000414510	PKD1L3	Q7Z443	1732 aa		33.18	■■■□□ 2.9
PTPA-210	ENST00000414510	DOT1L	Q8TEK3	1739 aa		33.18	■■■□□ 2.9
PTPA-210	ENST00000414510	NPC1L1	Q9UHC9	1359 aa		33.18	■■■□□ 2.9
PTPA-210	ENST00000414510	NUP188	Q5SRE5	1749 aa		33.17	■■■□□ 2.9
PTPA-210	ENST00000414510	TAT	P17735	454 aa	Predicted RBP	33.17	■■■□□ 2.9
PTPA-210	ENST00000414510	ZCRB1	Q8TBF4	217 aa	Known RBP	33.17	■■■□□ 2.9
PTPA-210	ENST00000414510	KCNQ2	O43526	872 aa		33.16	■■■□□ 2.9
PTPA-210	ENST00000414510	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.16	■■■□□ 2.9
PTPA-210	ENST00000414510	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.16	■■■□□ 2.9
PTPA-210	ENST00000414510	RGPD4	Q7Z3J3	1758 aa		33.16	■■■□□ 2.9
PTPA-210	ENST00000414510	BTAF1	O14981	1849 aa		33.13	■■■□□ 2.89
PTPA-210	ENST00000414510	PARD3	Q8TEW0	1356 aa		33.11	■■■□□ 2.89
PTPA-210	ENST00000414510	KAT6B	Q8WYB5	2073 aa		33.11	■■■□□ 2.89
PTPA-210	ENST00000414510	IGSF1	Q8N6C5	1336 aa		33.1	■■■□□ 2.89
PTPA-210	ENST00000414510	MTHFS	P49914	203 aa		33.1	■■■□□ 2.89
PTPA-210	ENST00000414510	PCDH11X	Q9BZA7	1347 aa		33.06	■■■□□ 2.88
PTPA-210	ENST00000414510	PCDH11Y	Q9BZA8	1340 aa		33.06	■■■□□ 2.88
PTPA-210	ENST00000414510	TOGARAM1	Q9Y4F4	1720 aa		33.05	■■■□□ 2.88
PTPA-210	ENST00000414510	PLSCR1	O15162	318 aa		33.03	■■■□□ 2.88
PTPA-210	ENST00000414510	IL13	P35225	146 aa		33.03	■■■□□ 2.88
PTPA-210	ENST00000414510	PSD	A5PKW4	1024 aa	Predicted RBP	33.02	■■■□□ 2.88
PTPA-210	ENST00000414510	CYP27B1	O15528	508 aa		33.02	■■■□□ 2.88
PTPA-210	ENST00000414510	AEBP1	Q8IUX7	1158 aa		33.02	■■■□□ 2.88
PTPA-210	ENST00000414510	COL3A1	P02461	1466 aa	Predicted RBP	33.01	■■■□□ 2.88
PTPA-210	ENST00000414510	ZEB1	P37275	1124 aa	Predicted RBP	33	■■■□□ 2.87
PTPA-210	ENST00000414510	SYTL4	Q96C24	671 aa	Predicted RBP	32.99	■■■□□ 2.87
PTPA-210	ENST00000414510	PRIM1	P49642	420 aa	Known RBP	32.98	■■■□□ 2.87
PTPA-210	ENST00000414510	PROM2	Q8N271	834 aa		32.97	■■■□□ 2.87
PTPA-210	ENST00000414510	SPG7	Q9UQ90	795 aa		32.97	■■■□□ 2.87
PTPA-210	ENST00000414510	ITGB4	P16144	1822 aa		32.95	■■■□□ 2.87
PTPA-210	ENST00000414510	R3HDM1	Q15032	1099 aa	Known RBP	32.95	■■■□□ 2.87
PTPA-210	ENST00000414510	SULT6B1	Q6IMI4	303 aa		32.95	■■■□□ 2.87
PTPA-210	ENST00000414510	TXNRD1	Q16881	649 aa		32.93	■■■□□ 2.86
PTPA-210	ENST00000414510	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
PTPA-210	ENST00000414510	KDR	P35968	1356 aa		32.93	■■■□□ 2.86
PTPA-210	ENST00000414510	DIAPH1	O60610	1272 aa	Known RBP	32.92	■■■□□ 2.86
PTPA-210	ENST00000414510	PLEKHG2	Q9H7P9	1386 aa		32.91	■■■□□ 2.86
PTPA-210	ENST00000414510	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.9	■■■□□ 2.86
PTPA-210	ENST00000414510	LY75	O60449	1722 aa		32.89	■■■□□ 2.86
PTPA-210	ENST00000414510	PHKG2	P15735	406 aa		32.89	■■■□□ 2.86
PTPA-210	ENST00000414510	PPP2R1A	P30153	589 aa		32.89	■■■□□ 2.86
PTPA-210	ENST00000414510	DDX10	Q13206	875 aa	Known RBP	32.89	■■■□□ 2.86
PTPA-210	ENST00000414510	HMOX1	P09601	288 aa		32.88	■■■□□ 2.85
PTPA-210	ENST00000414510	PAPPA	Q13219	1627 aa		32.88	■■■□□ 2.85
PTPA-210	ENST00000414510	NKX1-1	Q15270	411 aa	Predicted RBP	32.87	■■■□□ 2.85
PTPA-210	ENST00000414510	NBPF14	Q5TI25	921 aa		32.87	■■■□□ 2.85
PTPA-210	ENST00000414510	IFNL2	Q8IZJ0	200 aa		32.86	■■■□□ 2.85
PTPA-210	ENST00000414510	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.85	■■■□□ 2.85
PTPA-210	ENST00000414510	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.84	■■■□□ 2.85
PTPA-210	ENST00000414510	MPRIP	Q6WCQ1	1025 aa		32.82	■■■□□ 2.84
PTPA-210	ENST00000414510	U2SURP	O15042	1029 aa	Known RBP	32.81	■■■□□ 2.84
PTPA-210	ENST00000414510	LRRC4B	Q9NT99	713 aa		32.81	■■■□□ 2.84
PTPA-210	ENST00000414510	KCNQ4	P56696	695 aa		32.8	■■■□□ 2.84
PTPA-210	ENST00000414510	AMOT	Q4VCS5	1084 aa		32.8	■■■□□ 2.84
PTPA-210	ENST00000414510	CFAP53	Q96M91	514 aa		32.8	■■■□□ 2.84
PTPA-210	ENST00000414510	KDM6A	O15550	1401 aa	Predicted RBP	32.79	■■■□□ 2.84
PTPA-210	ENST00000414510	LRP5	O75197	1615 aa		32.77	■■■□□ 2.84
PTPA-210	ENST00000414510	CASZ1	Q86V15	1759 aa		32.77	■■■□□ 2.84
PTPA-210	ENST00000414510	PIGB	Q92521	554 aa		32.76	■■■□□ 2.83
PTPA-210	ENST00000414510	VIRMA	Q69YN4	1812 aa	Known RBP	32.75	■■■□□ 2.83
PTPA-210	ENST00000414510	PALLD	Q8WX93	1383 aa		32.74	■■■□□ 2.83
PTPA-210	ENST00000414510	SCN11A	Q9UI33	1791 aa		32.74	■■■□□ 2.83
PTPA-210	ENST00000414510	STK32B	Q9NY57	414 aa		32.74	■■■□□ 2.83
PTPA-210	ENST00000414510	C1orf141	Q5JVX7	400 aa		32.73	■■■□□ 2.83
PTPA-210	ENST00000414510	TMOD3	Q9NYL9	352 aa		32.73	■■■□□ 2.83
PTPA-210	ENST00000414510	TUBGCP6	Q96RT7	1819 aa		32.72	■■■□□ 2.83
PTPA-210	ENST00000414510	ZNF827	Q17R98	1081 aa		32.72	■■■□□ 2.83
PTPA-210	ENST00000414510	SLC27A3	Q5K4L6	730 aa		32.72	■■■□□ 2.83
PTPA-210	ENST00000414510	DCAF5	Q96JK2	942 aa		32.72	■■■□□ 2.83
PTPA-210	ENST00000414510	HSP90AB1	P08238	724 aa	Known RBP	32.71	■■■□□ 2.83
PTPA-210	ENST00000414510	SLC15A2	Q16348	729 aa		32.71	■■■□□ 2.83
PTPA-210	ENST00000414510	CCNL1	Q9UK58	526 aa	Predicted RBP	32.71	■■■□□ 2.83
PTPA-210	ENST00000414510	C5	P01031	1676 aa		32.71	■■■□□ 2.83
PTPA-210	ENST00000414510	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.7	■■■□□ 2.83
PTPA-210	ENST00000414510	TAF1L	Q8IZX4	1826 aa		32.7	■■■□□ 2.82
PTPA-210	ENST00000414510	MTHFSD	Q2M296	383 aa	Known RBP	32.69	■■■□□ 2.82
PTPA-210	ENST00000414510	AKAP4	Q5JQC9	854 aa		32.66	■■■□□ 2.82
PTPA-210	ENST00000414510	ASAP1	Q9ULH1	1129 aa		32.66	■■■□□ 2.82
PTPA-210	ENST00000414510	NUDC	Q9Y266	331 aa		32.66	■■■□□ 2.82
PTPA-210	ENST00000414510	ERVV-2	B6SEH9	535 aa		32.65	■■■□□ 2.82
PTPA-210	ENST00000414510	RSPH6A	Q9H0K4	717 aa		32.65	■■■□□ 2.82
PTPA-210	ENST00000414510	QSER1	Q2KHR3	1735 aa		32.65	■■■□□ 2.82
PTPA-210	ENST00000414510	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	RALBP1	Q15311	655 aa		32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	SMARCC1	Q92922	1105 aa	Predicted RBP	32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	AKT1S1	Q96B36	256 aa		32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	ADAMTS7	Q9UKP4	1686 aa		32.64	■■■□□ 2.82
PTPA-210	ENST00000414510	PRKAR2B	P31323	418 aa		32.63	■■■□□ 2.81
PTPA-210	ENST00000414510	CABP4	P57796	275 aa		32.62	■■■□□ 2.81
PTPA-210	ENST00000414510	ATG3	Q9NT62	314 aa		32.62	■■■□□ 2.81
PTPA-210	ENST00000414510	LGR6	Q9HBX8	967 aa		32.6	■■■□□ 2.81
PTPA-210	ENST00000414510	MRC1	P22897	1456 aa		32.6	■■■□□ 2.81
PTPA-210	ENST00000414510	C4B	P0C0L5	1744 aa		32.6	■■■□□ 2.81
PTPA-210	ENST00000414510	PHACTR3	Q96KR7	559 aa		32.58	■■■□□ 2.81
PTPA-210	ENST00000414510	RNMT	O43148	476 aa	Known RBP	32.57	■■■□□ 2.8
PTPA-210	ENST00000414510	LOC102724428	A0A0B4J2F2	783 aa		32.56	■■■□□ 2.8
PTPA-210	ENST00000414510	ZBTB7A	O95365	584 aa		32.56	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms