RNA–Protein interactions for RNA: ENST00000414054.5

LINC00486-201, long intergenic non-protein coding RNA 486, humanhuman

TSL 4 BASIC

Gene LINC00486, Length 1,794 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00486-201ENST00000414054 ACEP12821 1306 aa11.32□□□□□ -0.6
LINC00486-201ENST00000414054 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
LINC00486-201ENST00000414054 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 RBM6P78332 1123 aaKnown RBP11.31□□□□□ -0.6
LINC00486-201ENST00000414054 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
LINC00486-201ENST00000414054 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
LINC00486-201ENST00000414054 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
LINC00486-201ENST00000414054 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 EMILIN1Q9Y6C2 1016 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 RGS12O14924 1447 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 ATRNO75882 1429 aa11.31□□□□□ -0.6
LINC00486-201ENST00000414054 SLIT2O94813 1529 aa11.3□□□□□ -0.6
LINC00486-201ENST00000414054 IL13P35225 146 aa11.3□□□□□ -0.6
LINC00486-201ENST00000414054 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
LINC00486-201ENST00000414054 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
LINC00486-201ENST00000414054 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
LINC00486-201ENST00000414054 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
LINC00486-201ENST00000414054 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
LINC00486-201ENST00000414054 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
LINC00486-201ENST00000414054 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
LINC00486-201ENST00000414054 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
LINC00486-201ENST00000414054 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
LINC00486-201ENST00000414054 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
LINC00486-201ENST00000414054 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 PHRF1Q9P1Y6 1649 aaKnown RBP11.28□□□□□ -0.6
LINC00486-201ENST00000414054 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
LINC00486-201ENST00000414054 RGS3P49796 1198 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
LINC00486-201ENST00000414054 USP6P35125 1406 aa11.27□□□□□ -0.6
LINC00486-201ENST00000414054 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 IGHDP01880 384 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 HMOX1P09601 288 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 FBLN1P23142 703 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 GNAI1P63096 354 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 RWDD1Q9H446 243 aaPredicted RBP11.27□□□□□ -0.61
LINC00486-201ENST00000414054 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 GLI3P10071 1580 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 NRAPQ86VF7 1730 aa11.27□□□□□ -0.61
LINC00486-201ENST00000414054 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
LINC00486-201ENST00000414054 RLBP1P12271 317 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 RRS1Q15050 365 aaKnown RBP11.26□□□□□ -0.61
LINC00486-201ENST00000414054 GJD4Q96KN9 370 aaPredicted RBP11.26□□□□□ -0.61
LINC00486-201ENST00000414054 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
LINC00486-201ENST00000414054 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
LINC00486-201ENST00000414054 C8orf34Q49A92 452 aa11.25□□□□□ -0.61
LINC00486-201ENST00000414054 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
LINC00486-201ENST00000414054 TRIM27P14373 513 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 ABTB2Q8N961 1025 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00486-201ENST00000414054 PHACTR3Q96KR7 559 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
LINC00486-201ENST00000414054 USP35Q9P2H5 1018 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
LINC00486-201ENST00000414054 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 VPS72Q15906 364 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
LINC00486-201ENST00000414054 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
LINC00486-201ENST00000414054 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
LINC00486-201ENST00000414054 ZC3H6P61129 1189 aaKnown RBP11.22□□□□□ -0.61
LINC00486-201ENST00000414054 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
LINC00486-201ENST00000414054 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
LINC00486-201ENST00000414054 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
LINC00486-201ENST00000414054 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
LINC00486-201ENST00000414054 LAS1LQ9Y4W2 734 aaKnown RBP11.22□□□□□ -0.61
LINC00486-201ENST00000414054 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
LINC00486-201ENST00000414054 CHRNA2Q15822 529 aa11.21□□□□□ -0.61
LINC00486-201ENST00000414054 ARHGAP45Q92619 1136 aa11.21□□□□□ -0.61
LINC00486-201ENST00000414054 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
LINC00486-201ENST00000414054 USP19O94966 1318 aa11.21□□□□□ -0.61
LINC00486-201ENST00000414054 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.62
LINC00486-201ENST00000414054 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.62
LINC00486-201ENST00000414054 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.62
LINC00486-201ENST00000414054 DLG5Q8TDM6 1919 aa11.2□□□□□ -0.62
LINC00486-201ENST00000414054 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
LINC00486-201ENST00000414054 VAMP4O75379 141 aa11.19□□□□□ -0.62
LINC00486-201ENST00000414054 NLRP6P59044 892 aa11.19□□□□□ -0.62
LINC00486-201ENST00000414054 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
LINC00486-201ENST00000414054 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
LINC00486-201ENST00000414054 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms