RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
SDCBP-202ENST00000413219 CAVIN1Q6NZI2 390 aaKnown RBP21.66■■□□□ 1.06
SDCBP-202ENST00000413219 PTPRCP08575 1304 aa21.66■■□□□ 1.06
SDCBP-202ENST00000413219 KIAA0232Q92628 1395 aa21.66■■□□□ 1.06
SDCBP-202ENST00000413219 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.65■■□□□ 1.06
SDCBP-202ENST00000413219 C16orf71Q8IYS4 520 aaPredicted RBP21.65■■□□□ 1.06
SDCBP-202ENST00000413219 PDLIM2Q96JY6 352 aa21.65■■□□□ 1.06
SDCBP-202ENST00000413219 NME9Q86XW9 330 aa21.65■■□□□ 1.06
SDCBP-202ENST00000413219 RTL1A6NKG5 1358 aa21.65■■□□□ 1.06
SDCBP-202ENST00000413219 SETD1AO15047 1707 aaKnown RBP21.65■■□□□ 1.06
SDCBP-202ENST00000413219 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
SDCBP-202ENST00000413219 KIAA1211Q6ZU35 1233 aa21.64■■□□□ 1.05
SDCBP-202ENST00000413219 COG3Q96JB2 828 aa21.64■■□□□ 1.05
SDCBP-202ENST00000413219 FAM83GA6ND36 823 aa21.63■■□□□ 1.05
SDCBP-202ENST00000413219 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
SDCBP-202ENST00000413219 MON2Q7Z3U7 1717 aa21.62■■□□□ 1.05
SDCBP-202ENST00000413219 WASLO00401 505 aaPredicted RBP21.62■■□□□ 1.05
SDCBP-202ENST00000413219 ERC2O15083 957 aa21.62■■□□□ 1.05
SDCBP-202ENST00000413219 OTUD7AQ8TE49 926 aaPredicted RBP21.62■■□□□ 1.05
SDCBP-202ENST00000413219 NCLP19338 710 aaKnown RBP21.62■■□□□ 1.05
SDCBP-202ENST00000413219 OSBPL3Q9H4L5 887 aa21.62■■□□□ 1.05
SDCBP-202ENST00000413219 CHL1O00533 1208 aa21.61■■□□□ 1.05
SDCBP-202ENST00000413219 NOL7Q9UMY1 257 aaKnown RBP21.61■■□□□ 1.05
SDCBP-202ENST00000413219 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
SDCBP-202ENST00000413219 MSH6P52701 1360 aa21.61■■□□□ 1.05
SDCBP-202ENST00000413219 PKP1Q13835 747 aa21.6■■□□□ 1.05
SDCBP-202ENST00000413219 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
SDCBP-202ENST00000413219 RBSNQ9H1K0 784 aa21.6■■□□□ 1.05
SDCBP-202ENST00000413219 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
SDCBP-202ENST00000413219 ZNF500O60304 480 aaPredicted RBP21.6■■□□□ 1.05
SDCBP-202ENST00000413219 HMMRO75330 724 aa21.6■■□□□ 1.05
SDCBP-202ENST00000413219 ZDHHC9Q9Y397 364 aa21.6■■□□□ 1.05
SDCBP-202ENST00000413219 DCTN1Q14203 1278 aa21.59■■□□□ 1.05
SDCBP-202ENST00000413219 CPS1P31327 1500 aa21.59■■□□□ 1.05
SDCBP-202ENST00000413219 A2ML1A8K2U0 1454 aa21.59■■□□□ 1.05
SDCBP-202ENST00000413219 PRPF40AO75400 957 aaKnown RBP21.59■■□□□ 1.05
SDCBP-202ENST00000413219 ZGPATQ8N5A5 531 aaKnown RBP21.59■■□□□ 1.05
SDCBP-202ENST00000413219 GPT2Q8TD30 523 aa21.59■■□□□ 1.05
SDCBP-202ENST00000413219 PDCL3Q9H2J4 239 aa21.59■■□□□ 1.05
SDCBP-202ENST00000413219 C3P01024 1663 aa21.58■■□□□ 1.05
SDCBP-202ENST00000413219 MCM2P49736 904 aa21.58■■□□□ 1.05
SDCBP-202ENST00000413219 ZRANB1Q9UGI0 708 aa21.58■■□□□ 1.05
SDCBP-202ENST00000413219 MCM5P33992 734 aa21.57■■□□□ 1.04
SDCBP-202ENST00000413219 LRSAM1Q6UWE0 723 aa21.57■■□□□ 1.04
SDCBP-202ENST00000413219 MBD3O95983 291 aa21.57■■□□□ 1.04
SDCBP-202ENST00000413219 PRIM1P49642 420 aaKnown RBP21.57■■□□□ 1.04
SDCBP-202ENST00000413219 SMARCA5O60264 1052 aaPredicted RBP21.56■■□□□ 1.04
SDCBP-202ENST00000413219 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
SDCBP-202ENST00000413219 MEIS3Q99687 375 aa21.56■■□□□ 1.04
SDCBP-202ENST00000413219 AKAP12Q02952 1782 aa21.56■■□□□ 1.04
SDCBP-202ENST00000413219 NUDT16Q96DE0 195 aaKnown RBP21.55■■□□□ 1.04
SDCBP-202ENST00000413219 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
SDCBP-202ENST00000413219 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
SDCBP-202ENST00000413219 CCDC61Q9Y6R9 512 aa21.54■■□□□ 1.04
SDCBP-202ENST00000413219 PDE1AP54750 535 aa21.54■■□□□ 1.04
SDCBP-202ENST00000413219 TMEM63CQ9P1W3 806 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 ZKSCAN5Q9Y2L8 839 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 CUL4AQ13619 759 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 EIF4A2Q14240 407 aaKnown RBP21.52■■□□□ 1.04
SDCBP-202ENST00000413219 ITSN1Q15811 1721 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
SDCBP-202ENST00000413219 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.52■■□□□ 1.04
SDCBP-202ENST00000413219 RBM27Q9P2N5 1060 aaKnown RBP21.52■■□□□ 1.04
SDCBP-202ENST00000413219 CCT4P50991 539 aaKnown RBP21.51■■□□□ 1.03
SDCBP-202ENST00000413219 ANAPC15P60006 121 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 CSPP1Q1MSJ5 1256 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 TMX3Q96JJ7 454 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 BRD1O95696 1058 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 SULT6B1Q6IMI4 303 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 INTS4Q96HW7 963 aaKnown RBP21.51■■□□□ 1.03
SDCBP-202ENST00000413219 CCDC39Q9UFE4 941 aa21.51■■□□□ 1.03
SDCBP-202ENST00000413219 NRXN3Q9Y4C0 1643 aa21.5■■□□□ 1.03
SDCBP-202ENST00000413219 TECPR2O15040 1411 aa21.5■■□□□ 1.03
SDCBP-202ENST00000413219 CRB1P82279 1406 aa21.5■■□□□ 1.03
SDCBP-202ENST00000413219 APBB1O00213 710 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 MCCP23508 829 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 NEK4P51957 841 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 AEBP1Q8IUX7 1158 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 SALL3Q9BXA9 1300 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 SSH2Q76I76 1423 aa21.49■■□□□ 1.03
SDCBP-202ENST00000413219 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
SDCBP-202ENST00000413219 MAP7D2Q96T17 732 aa21.48■■□□□ 1.03
SDCBP-202ENST00000413219 ESYT1Q9BSJ8 1104 aa21.48■■□□□ 1.03
SDCBP-202ENST00000413219 AGLP35573 1532 aa21.48■■□□□ 1.03
SDCBP-202ENST00000413219 ARHGEF10O15013 1369 aa21.47■■□□□ 1.03
SDCBP-202ENST00000413219 RGPD1P0DJD0 1748 aa21.47■■□□□ 1.03
SDCBP-202ENST00000413219 SYCE3A1L190 88 aa21.47■■□□□ 1.03
SDCBP-202ENST00000413219 MCM10Q7L590 875 aa21.47■■□□□ 1.03
SDCBP-202ENST00000413219 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
SDCBP-202ENST00000413219 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
SDCBP-202ENST00000413219 SYAP1Q96A49 352 aaPredicted RBP21.46■■□□□ 1.03
SDCBP-202ENST00000413219 TUBGCP6Q96RT7 1819 aa21.46■■□□□ 1.03
SDCBP-202ENST00000413219 EPB41L2O43491 1005 aaKnown RBP21.46■■□□□ 1.03
SDCBP-202ENST00000413219 METP08581 1390 aa21.45■■□□□ 1.02
SDCBP-202ENST00000413219 GNAI2P04899 355 aa21.45■■□□□ 1.02
SDCBP-202ENST00000413219 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.02
SDCBP-202ENST00000413219 OVOS2A0A0J9YW53 1432 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms