RNA–Protein interactions for RNA: ENST00000413124.2

LINC00424-201, long intergenic non-protein coding RNA 424, humanhuman

TSL 4 BASIC

Gene LINC00424, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00424-201ENST00000413124 COL13A1Q5TAT6 717 aaPredicted RBP15.72■□□□□ 0.11
LINC00424-201ENST00000413124 KCNQ4P56696 695 aa15.71■□□□□ 0.11
LINC00424-201ENST00000413124 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
LINC00424-201ENST00000413124 FLAD1Q8NFF5 587 aa15.71■□□□□ 0.11
LINC00424-201ENST00000413124 CCNL1Q9UK58 526 aaPredicted RBP15.71■□□□□ 0.11
LINC00424-201ENST00000413124 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
LINC00424-201ENST00000413124 DDX54Q8TDD1 881 aaKnown RBP15.7■□□□□ 0.1
LINC00424-201ENST00000413124 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
LINC00424-201ENST00000413124 NSD2O96028 1365 aa15.69■□□□□ 0.1
LINC00424-201ENST00000413124 USP47Q96K76 1375 aa15.67■□□□□ 0.1
LINC00424-201ENST00000413124 PRELPP51888 382 aa15.67■□□□□ 0.1
LINC00424-201ENST00000413124 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
LINC00424-201ENST00000413124 TOMM70O94826 608 aa15.66■□□□□ 0.1
LINC00424-201ENST00000413124 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
LINC00424-201ENST00000413124 RGPD5Q99666 1765 aa15.66■□□□□ 0.1
LINC00424-201ENST00000413124 TNS4Q8IZW8 715 aa15.65■□□□□ 0.1
LINC00424-201ENST00000413124 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
LINC00424-201ENST00000413124 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
LINC00424-201ENST00000413124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC00424-201ENST00000413124 IP6K1Q92551 441 aa15.64■□□□□ 0.09
LINC00424-201ENST00000413124 SBNO2Q9Y2G9 1366 aa15.63■□□□□ 0.09
LINC00424-201ENST00000413124 NME9Q86XW9 330 aa15.63■□□□□ 0.09
LINC00424-201ENST00000413124 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
LINC00424-201ENST00000413124 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
LINC00424-201ENST00000413124 LY75O60449 1722 aa15.62■□□□□ 0.09
LINC00424-201ENST00000413124 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
LINC00424-201ENST00000413124 NSD3Q9BZ95 1437 aa15.61■□□□□ 0.09
LINC00424-201ENST00000413124 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
LINC00424-201ENST00000413124 KLRG1Q96E93 195 aa15.61■□□□□ 0.09
LINC00424-201ENST00000413124 EDC4Q6P2E9 1401 aaKnown RBP15.6■□□□□ 0.09
LINC00424-201ENST00000413124 TUBGCP6Q96RT7 1819 aa15.6■□□□□ 0.09
LINC00424-201ENST00000413124 HDGFL2Q7Z4V5 671 aaPredicted RBP15.6■□□□□ 0.09
LINC00424-201ENST00000413124 WWC3Q9ULE0 1092 aa15.6■□□□□ 0.09
LINC00424-201ENST00000413124 CICQ96RK0 1608 aaPredicted RBP15.58■□□□□ 0.09
LINC00424-201ENST00000413124 FAM208AQ9UK61 1670 aaKnown RBP15.58■□□□□ 0.08
LINC00424-201ENST00000413124 MON2Q7Z3U7 1717 aa15.58■□□□□ 0.08
LINC00424-201ENST00000413124 CD163L1Q9NR16 1453 aa15.58■□□□□ 0.08
LINC00424-201ENST00000413124 HTRA3P83110 453 aa15.57■□□□□ 0.08
LINC00424-201ENST00000413124 ROCK2O75116 1388 aaKnown RBP15.57■□□□□ 0.08
LINC00424-201ENST00000413124 PALLDQ8WX93 1383 aa15.57■□□□□ 0.08
LINC00424-201ENST00000413124 RBM46Q8TBY0 533 aaKnown RBP15.56■□□□□ 0.08
LINC00424-201ENST00000413124 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
LINC00424-201ENST00000413124 AK7Q96M32 723 aa15.56■□□□□ 0.08
LINC00424-201ENST00000413124 TERF2IPQ9NYB0 399 aa15.56■□□□□ 0.08
LINC00424-201ENST00000413124 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
LINC00424-201ENST00000413124 MEGF6O75095 1541 aa15.55■□□□□ 0.08
LINC00424-201ENST00000413124 SSFA2P28290 1259 aa15.55■□□□□ 0.08
LINC00424-201ENST00000413124 FSTL1Q12841 308 aa15.55■□□□□ 0.08
LINC00424-201ENST00000413124 SMARCC1Q92922 1105 aaPredicted RBP15.55■□□□□ 0.08
LINC00424-201ENST00000413124 KAT6BQ8WYB5 2073 aa15.55■□□□□ 0.08
LINC00424-201ENST00000413124 HOXC9P31274 260 aa15.54■□□□□ 0.08
LINC00424-201ENST00000413124 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
LINC00424-201ENST00000413124 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 PCDH11XQ9BZA7 1347 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 PCDH11YQ9BZA8 1340 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.53■□□□□ 0.08
LINC00424-201ENST00000413124 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
LINC00424-201ENST00000413124 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
LINC00424-201ENST00000413124 LTN1O94822 1766 aa15.52■□□□□ 0.08
LINC00424-201ENST00000413124 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
LINC00424-201ENST00000413124 AMPHP49418 695 aa15.52■□□□□ 0.08
LINC00424-201ENST00000413124 TGFB2P61812 414 aa15.52■□□□□ 0.08
LINC00424-201ENST00000413124 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
LINC00424-201ENST00000413124 PLEKHG2Q9H7P9 1386 aa15.51■□□□□ 0.07
LINC00424-201ENST00000413124 SLC34A2O95436 690 aa15.51■□□□□ 0.07
LINC00424-201ENST00000413124 C16orf71Q8IYS4 520 aaPredicted RBP15.51■□□□□ 0.07
LINC00424-201ENST00000413124 C5P01031 1676 aa15.51■□□□□ 0.07
LINC00424-201ENST00000413124 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
LINC00424-201ENST00000413124 COG3Q96JB2 828 aa15.5■□□□□ 0.07
LINC00424-201ENST00000413124 SLC12A5Q9H2X9 1139 aa15.5■□□□□ 0.07
LINC00424-201ENST00000413124 PXDNLA1KZ92 1463 aa15.49■□□□□ 0.07
LINC00424-201ENST00000413124 PHF14O94880 888 aa15.49■□□□□ 0.07
LINC00424-201ENST00000413124 TATP17735 454 aaPredicted RBP15.49■□□□□ 0.07
LINC00424-201ENST00000413124 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
LINC00424-201ENST00000413124 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
LINC00424-201ENST00000413124 NBPF6Q5VWK0 638 aa15.48■□□□□ 0.07
LINC00424-201ENST00000413124 MPRIPQ6WCQ1 1025 aa15.48■□□□□ 0.07
LINC00424-201ENST00000413124 NBPF4Q96M43 638 aa15.48■□□□□ 0.07
LINC00424-201ENST00000413124 C10orf71Q711Q0 1435 aa15.48■□□□□ 0.07
LINC00424-201ENST00000413124 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
LINC00424-201ENST00000413124 BCS1LQ9Y276 419 aa15.47■□□□□ 0.07
LINC00424-201ENST00000413124 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
LINC00424-201ENST00000413124 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
LINC00424-201ENST00000413124 LOC102724428A0A0B4J2F2 783 aa15.45■□□□□ 0.06
LINC00424-201ENST00000413124 MMP10P09238 476 aa15.45■□□□□ 0.06
LINC00424-201ENST00000413124 SIK1P57059 783 aa15.45■□□□□ 0.06
LINC00424-201ENST00000413124 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
LINC00424-201ENST00000413124 HSPA1AP0DMV8 641 aaKnown RBP15.44■□□□□ 0.06
LINC00424-201ENST00000413124 HSPA1BP0DMV9 641 aaKnown RBP15.44■□□□□ 0.06
LINC00424-201ENST00000413124 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
LINC00424-201ENST00000413124 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
LINC00424-201ENST00000413124 GNPATO15228 680 aa15.43■□□□□ 0.06
LINC00424-201ENST00000413124 CYP27B1O15528 508 aa15.43■□□□□ 0.06
LINC00424-201ENST00000413124 PIGBQ92521 554 aa15.43■□□□□ 0.06
LINC00424-201ENST00000413124 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
LINC00424-201ENST00000413124 TOGARAM1Q9Y4F4 1720 aa15.43■□□□□ 0.06
LINC00424-201ENST00000413124 FCHSD2O94868 740 aa15.42■□□□□ 0.06
LINC00424-201ENST00000413124 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms