RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 TNS1Q9HBL0 1735 aaKnown RBP27.63■■■□□ 2.01
LSM12P1-201ENST00000411836 SPG7Q9UQ90 795 aa27.61■■■□□ 2.01
LSM12P1-201ENST00000411836 CAMKK2Q96RR4 588 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 PCDH11XQ9BZA7 1347 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 PCDH11YQ9BZA8 1340 aa27.6■■■□□ 2.01
LSM12P1-201ENST00000411836 KCNQ2O43526 872 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 PTF1AQ7RTS3 328 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 IGSF1Q8N6C5 1336 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 PARD3Q8TEW0 1356 aa27.59■■■□□ 2.01
LSM12P1-201ENST00000411836 SYTL4Q96C24 671 aaPredicted RBP27.58■■■□□ 2.01
LSM12P1-201ENST00000411836 NCAPD2Q15021 1401 aa27.58■■■□□ 2
LSM12P1-201ENST00000411836 IL13P35225 146 aa27.57■■■□□ 2
LSM12P1-201ENST00000411836 DDX10Q13206 875 aaKnown RBP27.57■■■□□ 2
LSM12P1-201ENST00000411836 SBF2Q86WG5 1849 aa27.57■■■□□ 2
LSM12P1-201ENST00000411836 DIAPH1O60610 1272 aaKnown RBP27.56■■■□□ 2
LSM12P1-201ENST00000411836 PLSCR1O15162 318 aa27.55■■■□□ 2
LSM12P1-201ENST00000411836 SULT6B1Q6IMI4 303 aa27.54■■■□□ 2
LSM12P1-201ENST00000411836 CFAP53Q96M91 514 aa27.54■■■□□ 2
LSM12P1-201ENST00000411836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.54■■■□□ 2
LSM12P1-201ENST00000411836 PRIM1P49642 420 aaKnown RBP27.52■■■□□ 2
LSM12P1-201ENST00000411836 KAT6BQ8WYB5 2073 aa27.52■■■□□ 2
LSM12P1-201ENST00000411836 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
LSM12P1-201ENST00000411836 AEBP1Q8IUX7 1158 aa27.51■■□□□ 1.99
LSM12P1-201ENST00000411836 CYP27B1O15528 508 aa27.5■■□□□ 1.99
LSM12P1-201ENST00000411836 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
LSM12P1-201ENST00000411836 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
LSM12P1-201ENST00000411836 NBPF14Q5TI25 921 aa27.49■■□□□ 1.99
LSM12P1-201ENST00000411836 SHANK3Q9BYB0 1731 aa27.48■■□□□ 1.99
LSM12P1-201ENST00000411836 IFNL2Q8IZJ0 200 aa27.48■■□□□ 1.99
LSM12P1-201ENST00000411836 U2SURPO15042 1029 aaKnown RBP27.47■■□□□ 1.99
LSM12P1-201ENST00000411836 AMOTQ4VCS5 1084 aa27.47■■□□□ 1.99
LSM12P1-201ENST00000411836 HMOX1P09601 288 aa27.46■■□□□ 1.99
LSM12P1-201ENST00000411836 PSDA5PKW4 1024 aaPredicted RBP27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 TXNRD1Q16881 649 aa27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 PLEKHG2Q9H7P9 1386 aa27.45■■□□□ 1.98
LSM12P1-201ENST00000411836 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
LSM12P1-201ENST00000411836 PHKG2P15735 406 aa27.44■■□□□ 1.98
LSM12P1-201ENST00000411836 R3HDM1Q15032 1099 aaKnown RBP27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 ZNF530Q6P9A1 599 aaPredicted RBP27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 NUDCQ9Y266 331 aa27.43■■□□□ 1.98
LSM12P1-201ENST00000411836 DOT1LQ8TEK3 1739 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 C1orf141Q5JVX7 400 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 MPRIPQ6WCQ1 1025 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 KDRP35968 1356 aa27.42■■□□□ 1.98
LSM12P1-201ENST00000411836 HSP90AB1P08238 724 aaKnown RBP27.41■■□□□ 1.98
LSM12P1-201ENST00000411836 NKX1-1Q15270 411 aaPredicted RBP27.41■■□□□ 1.98
LSM12P1-201ENST00000411836 BTAF1O14981 1849 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 PROM2Q8N271 834 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RGPD3A6NKT7 1758 aaPredicted RBP27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RGPD4Q7Z3J3 1758 aa27.4■■□□□ 1.98
LSM12P1-201ENST00000411836 RREB1Q92766 1687 aa27.39■■□□□ 1.97
LSM12P1-201ENST00000411836 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
LSM12P1-201ENST00000411836 RALBP1Q15311 655 aa27.38■■□□□ 1.97
LSM12P1-201ENST00000411836 TMOD3Q9NYL9 352 aa27.37■■□□□ 1.97
LSM12P1-201ENST00000411836 NUP188Q5SRE5 1749 aa27.36■■□□□ 1.97
LSM12P1-201ENST00000411836 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 STK32BQ9NY57 414 aa27.35■■□□□ 1.97
LSM12P1-201ENST00000411836 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 SLC27A3Q5K4L6 730 aa27.34■■□□□ 1.97
LSM12P1-201ENST00000411836 PIGBQ92521 554 aa27.32■■□□□ 1.96
LSM12P1-201ENST00000411836 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
LSM12P1-201ENST00000411836 ERVV-2B6SEH9 535 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 CABP4P57796 275 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 AKAP4Q5JQC9 854 aa27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 CCNL1Q9UK58 526 aaPredicted RBP27.3■■□□□ 1.96
LSM12P1-201ENST00000411836 ANO8Q9HCE9 1232 aaPredicted RBP27.29■■□□□ 1.96
LSM12P1-201ENST00000411836 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
LSM12P1-201ENST00000411836 LRRC4BQ9NT99 713 aa27.28■■□□□ 1.96
LSM12P1-201ENST00000411836 TOGARAM1Q9Y4F4 1720 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 PALLDQ8WX93 1383 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 PRKAR2BP31323 418 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 KCNQ4P56696 695 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 SLC15A2Q16348 729 aa27.27■■□□□ 1.96
LSM12P1-201ENST00000411836 MYBBP1AQ9BQG0 1328 aaKnown RBP27.26■■□□□ 1.95
LSM12P1-201ENST00000411836 HMGB2P26583 209 aaKnown RBP27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 GAS2L2Q8NHY3 880 aa27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 ITGB4P16144 1822 aa27.25■■□□□ 1.95
LSM12P1-201ENST00000411836 FCHSD2O94868 740 aa27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 RSPH6AQ9H0K4 717 aa27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
LSM12P1-201ENST00000411836 NEFMP07197 916 aa27.23■■□□□ 1.95
LSM12P1-201ENST00000411836 ASAP1Q9ULH1 1129 aa27.23■■□□□ 1.95
LSM12P1-201ENST00000411836 NFATC2IPQ8NCF5 419 aa27.2■■□□□ 1.94
LSM12P1-201ENST00000411836 ATG3Q9NT62 314 aa27.2■■□□□ 1.94
LSM12P1-201ENST00000411836 PRKRIP1Q9H875 184 aaPredicted RBP27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LGR6Q9HBX8 967 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 TFCP2L1Q9NZI6 479 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LY75O60449 1722 aa27.19■■□□□ 1.94
LSM12P1-201ENST00000411836 LOC102724428A0A0B4J2F2 783 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 GNAT3A8MTJ3 354 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 RNMTO43148 476 aaKnown RBP27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 SIK1P57059 783 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
LSM12P1-201ENST00000411836 RBM42Q9BTD8 480 aaKnown RBP27.17■■□□□ 1.94
LSM12P1-201ENST00000411836 PNNQ9H307 717 aaKnown RBP27.17■■□□□ 1.94
LSM12P1-201ENST00000411836 AKT1S1Q96B36 256 aa27.16■■□□□ 1.94
LSM12P1-201ENST00000411836 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 422 ms