RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 RGPD8O14715 1765 aaPredicted RBP9.69□□□□□ -0.86
LINC00396-201ENST00000411690 PLSCR1O15162 318 aa9.69□□□□□ -0.86
LINC00396-201ENST00000411690 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
LINC00396-201ENST00000411690 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
LINC00396-201ENST00000411690 ABCC11Q96J66 1382 aa9.69□□□□□ -0.86
LINC00396-201ENST00000411690 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
LINC00396-201ENST00000411690 C11orf95C9JLR9 678 aaPredicted RBP9.68□□□□□ -0.86
LINC00396-201ENST00000411690 GPR162Q16538 588 aa9.68□□□□□ -0.86
LINC00396-201ENST00000411690 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
LINC00396-201ENST00000411690 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
LINC00396-201ENST00000411690 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
LINC00396-201ENST00000411690 EVA1CP58658 441 aa9.67□□□□□ -0.86
LINC00396-201ENST00000411690 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
LINC00396-201ENST00000411690 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
LINC00396-201ENST00000411690 GPRASP1Q5JY77 1395 aa9.66□□□□□ -0.86
LINC00396-201ENST00000411690 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
LINC00396-201ENST00000411690 HCSTQ9UBK5 93 aa9.66□□□□□ -0.86
LINC00396-201ENST00000411690 PPLO60437 1756 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 ADGRF5Q8IZF2 1346 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 TCP11L2Q8N4U5 519 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 SIRT1Q96EB6 747 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 ARXQ96QS3 562 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 STK32BQ9NY57 414 aa9.65□□□□□ -0.86
LINC00396-201ENST00000411690 IFT172Q9UG01 1749 aa9.65□□□□□ -0.87
LINC00396-201ENST00000411690 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
LINC00396-201ENST00000411690 LOC105371045A0A1W2PR82 267 aa9.64□□□□□ -0.87
LINC00396-201ENST00000411690 HSPA6P17066 643 aa9.64□□□□□ -0.87
LINC00396-201ENST00000411690 ITGAEP38570 1179 aa9.64□□□□□ -0.87
LINC00396-201ENST00000411690 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
LINC00396-201ENST00000411690 TRPM3Q9HCF6 1732 aaPredicted RBP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 SLC34A2O95436 690 aa9.63□□□□□ -0.87
LINC00396-201ENST00000411690 ZC3H6P61129 1189 aaKnown RBP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
LINC00396-201ENST00000411690 THRAP3Q9Y2W1 955 aaKnown RBP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 ALS2Q96Q42 1657 aa9.63□□□□□ -0.87
LINC00396-201ENST00000411690 YTHDC2Q9H6S0 1430 aaKnown RBP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
LINC00396-201ENST00000411690 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
LINC00396-201ENST00000411690 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
LINC00396-201ENST00000411690 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
LINC00396-201ENST00000411690 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
LINC00396-201ENST00000411690 SSH2Q76I76 1423 aa9.62□□□□□ -0.87
LINC00396-201ENST00000411690 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
LINC00396-201ENST00000411690 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
LINC00396-201ENST00000411690 OVOS2A0A0G2JMS6 1433 aa9.61□□□□□ -0.87
LINC00396-201ENST00000411690 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
LINC00396-201ENST00000411690 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
LINC00396-201ENST00000411690 SHANK3Q9BYB0 1731 aa9.61□□□□□ -0.87
LINC00396-201ENST00000411690 UTRNP46939 3433 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 CRYBG1Q9Y4K1 1723 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 TXNRD1Q16881 649 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 PTF1AQ7RTS3 328 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
LINC00396-201ENST00000411690 PRAM1Q96QH2 718 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 CEP350Q5VT06 3117 aa9.6□□□□□ -0.87
LINC00396-201ENST00000411690 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
LINC00396-201ENST00000411690 DMRTA1Q5VZB9 504 aa9.59□□□□□ -0.87
LINC00396-201ENST00000411690 POGKQ9P215 609 aa9.59□□□□□ -0.87
LINC00396-201ENST00000411690 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
LINC00396-201ENST00000411690 HRO43593 1189 aa9.58□□□□□ -0.88
LINC00396-201ENST00000411690 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
LINC00396-201ENST00000411690 ANKRD30BQ9BXX2 1392 aa9.58□□□□□ -0.88
LINC00396-201ENST00000411690 PARP4Q9UKK3 1724 aaKnown RBP9.57□□□□□ -0.88
LINC00396-201ENST00000411690 GRIN3BO60391 1043 aa9.57□□□□□ -0.88
LINC00396-201ENST00000411690 PSEN2P49810 448 aa9.57□□□□□ -0.88
LINC00396-201ENST00000411690 DDB1Q16531 1140 aa9.57□□□□□ -0.88
LINC00396-201ENST00000411690 NUTM2GQ5VZR2 741 aa9.57□□□□□ -0.88
LINC00396-201ENST00000411690 PIK3C2GO75747 1445 aa9.56□□□□□ -0.88
LINC00396-201ENST00000411690 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
LINC00396-201ENST00000411690 HIRIP3Q9BW71 556 aaPredicted RBP9.56□□□□□ -0.88
LINC00396-201ENST00000411690 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
LINC00396-201ENST00000411690 ATP10DQ9P241 1426 aa9.56□□□□□ -0.88
LINC00396-201ENST00000411690 PRR36Q9H6K5 1346 aa9.56□□□□□ -0.88
LINC00396-201ENST00000411690 ATP7BP35670 1465 aa9.55□□□□□ -0.88
LINC00396-201ENST00000411690 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
LINC00396-201ENST00000411690 TMC2Q8TDI7 906 aa9.55□□□□□ -0.88
LINC00396-201ENST00000411690 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
LINC00396-201ENST00000411690 PHRF1Q9P1Y6 1649 aaKnown RBP9.55□□□□□ -0.88
LINC00396-201ENST00000411690 STK25O00506 426 aa9.54□□□□□ -0.88
LINC00396-201ENST00000411690 POLD1P28340 1107 aa9.54□□□□□ -0.88
LINC00396-201ENST00000411690 CRB1P82279 1406 aa9.54□□□□□ -0.88
LINC00396-201ENST00000411690 TK2O00142 265 aa9.53□□□□□ -0.88
LINC00396-201ENST00000411690 YBX3P16989 372 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 APLP1P51693 650 aa9.53□□□□□ -0.88
LINC00396-201ENST00000411690 CFAP70Q5T0N1 1121 aa9.53□□□□□ -0.88
LINC00396-201ENST00000411690 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
LINC00396-201ENST00000411690 ZNF526Q8TF50 670 aaPredicted RBP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
LINC00396-201ENST00000411690 CPDO75976 1380 aa9.52□□□□□ -0.88
LINC00396-201ENST00000411690 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
LINC00396-201ENST00000411690 PRELPP51888 382 aa9.52□□□□□ -0.89
LINC00396-201ENST00000411690 SLC16A10Q8TF71 515 aa9.52□□□□□ -0.89
LINC00396-201ENST00000411690 COL5A2P05997 1499 aaPredicted RBP9.52□□□□□ -0.89
LINC00396-201ENST00000411690 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms