RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 EN1Q05925 392 aaPredicted RBP31.84■■■□□ 2.69
R3HCC1-202ENST00000411463 BCL11BQ9C0K0 894 aaPredicted RBP31.84■■■□□ 2.69
R3HCC1-202ENST00000411463 TNS1Q9HBL0 1735 aaKnown RBP31.84■■■□□ 2.69
R3HCC1-202ENST00000411463 PTF1AQ7RTS3 328 aa31.82■■■□□ 2.68
R3HCC1-202ENST00000411463 ACSBG1Q96GR2 724 aa31.8■■■□□ 2.68
R3HCC1-202ENST00000411463 PCDH11XQ9BZA7 1347 aa31.79■■■□□ 2.68
R3HCC1-202ENST00000411463 PCDH11YQ9BZA8 1340 aa31.79■■■□□ 2.68
R3HCC1-202ENST00000411463 KCNQ2O43526 872 aa31.78■■■□□ 2.68
R3HCC1-202ENST00000411463 CAMKK2Q96RR4 588 aa31.78■■■□□ 2.68
R3HCC1-202ENST00000411463 SPG7Q9UQ90 795 aa31.78■■■□□ 2.68
R3HCC1-202ENST00000411463 DIAPH1O60610 1272 aaKnown RBP31.78■■■□□ 2.68
R3HCC1-202ENST00000411463 PPP2R1AP30153 589 aa31.78■■■□□ 2.68
R3HCC1-202ENST00000411463 EZH2Q15910 746 aaKnown RBP31.77■■■□□ 2.68
R3HCC1-202ENST00000411463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.77■■■□□ 2.68
R3HCC1-202ENST00000411463 SBF2Q86WG5 1849 aa31.76■■■□□ 2.67
R3HCC1-202ENST00000411463 SULT6B1Q6IMI4 303 aa31.75■■■□□ 2.67
R3HCC1-202ENST00000411463 AEBP1Q8IUX7 1158 aa31.75■■■□□ 2.67
R3HCC1-202ENST00000411463 CYP27B1O15528 508 aa31.74■■■□□ 2.67
R3HCC1-202ENST00000411463 PARD3Q8TEW0 1356 aa31.74■■■□□ 2.67
R3HCC1-202ENST00000411463 SHANK3Q9BYB0 1731 aa31.73■■■□□ 2.67
R3HCC1-202ENST00000411463 PLEKHG2Q9H7P9 1386 aa31.73■■■□□ 2.67
R3HCC1-202ENST00000411463 PLSCR1O15162 318 aa31.72■■■□□ 2.67
R3HCC1-202ENST00000411463 CFAP53Q96M91 514 aa31.72■■■□□ 2.67
R3HCC1-202ENST00000411463 KDRP35968 1356 aa31.71■■■□□ 2.67
R3HCC1-202ENST00000411463 COL3A1P02461 1466 aaPredicted RBP31.7■■■□□ 2.67
R3HCC1-202ENST00000411463 PKD1L3Q7Z443 1732 aa31.7■■■□□ 2.66
R3HCC1-202ENST00000411463 NHSQ6T4R5 1651 aa31.7■■■□□ 2.66
R3HCC1-202ENST00000411463 PRIM1P49642 420 aaKnown RBP31.69■■■□□ 2.66
R3HCC1-202ENST00000411463 SYTL4Q96C24 671 aaPredicted RBP31.69■■■□□ 2.66
R3HCC1-202ENST00000411463 PLEKHO1Q53GL0 409 aaPredicted RBP31.68■■■□□ 2.66
R3HCC1-202ENST00000411463 ZNF316A6NFI3 1004 aaPredicted RBP31.66■■■□□ 2.66
R3HCC1-202ENST00000411463 HMOX1P09601 288 aa31.66■■■□□ 2.66
R3HCC1-202ENST00000411463 AMOTQ4VCS5 1084 aa31.65■■■□□ 2.66
R3HCC1-202ENST00000411463 IFNL2Q8IZJ0 200 aa31.65■■■□□ 2.66
R3HCC1-202ENST00000411463 U2SURPO15042 1029 aaKnown RBP31.65■■■□□ 2.66
R3HCC1-202ENST00000411463 NKX1-1Q15270 411 aaPredicted RBP31.65■■■□□ 2.66
R3HCC1-202ENST00000411463 PHKG2P15735 406 aa31.64■■■□□ 2.66
R3HCC1-202ENST00000411463 RALBP1Q15311 655 aa31.64■■■□□ 2.66
R3HCC1-202ENST00000411463 ZNF530Q6P9A1 599 aaPredicted RBP31.6■■■□□ 2.65
R3HCC1-202ENST00000411463 PROM2Q8N271 834 aa31.6■■■□□ 2.65
R3HCC1-202ENST00000411463 NUDCQ9Y266 331 aa31.6■■■□□ 2.65
R3HCC1-202ENST00000411463 DOT1LQ8TEK3 1739 aa31.6■■■□□ 2.65
R3HCC1-202ENST00000411463 TXNRD1Q16881 649 aa31.59■■■□□ 2.65
R3HCC1-202ENST00000411463 RGPD3A6NKT7 1758 aaPredicted RBP31.58■■■□□ 2.65
R3HCC1-202ENST00000411463 RGPD4Q7Z3J3 1758 aa31.58■■■□□ 2.65
R3HCC1-202ENST00000411463 BTAF1O14981 1849 aa31.56■■■□□ 2.64
R3HCC1-202ENST00000411463 MPRIPQ6WCQ1 1025 aa31.56■■■□□ 2.64
R3HCC1-202ENST00000411463 RREB1Q92766 1687 aa31.56■■■□□ 2.64
R3HCC1-202ENST00000411463 KAT6BQ8WYB5 2073 aa31.56■■■□□ 2.64
R3HCC1-202ENST00000411463 HSP90AB1P08238 724 aaKnown RBP31.55■■■□□ 2.64
R3HCC1-202ENST00000411463 C1orf141Q5JVX7 400 aa31.55■■■□□ 2.64
R3HCC1-202ENST00000411463 NBPF14Q5TI25 921 aa31.54■■■□□ 2.64
R3HCC1-202ENST00000411463 DCAF5Q96JK2 942 aa31.53■■■□□ 2.64
R3HCC1-202ENST00000411463 U2AF1L5P0DN76 240 aaPredicted RBP31.52■■■□□ 2.64
R3HCC1-202ENST00000411463 U2AF1Q01081 240 aaKnown RBP eCLIP31.52■■■□□ 2.64
R3HCC1-202ENST00000411463 PSDA5PKW4 1024 aaPredicted RBP31.51■■■□□ 2.63
R3HCC1-202ENST00000411463 NUP188Q5SRE5 1749 aa31.5■■■□□ 2.63
R3HCC1-202ENST00000411463 MYBBP1AQ9BQG0 1328 aaKnown RBP31.5■■■□□ 2.63
R3HCC1-202ENST00000411463 R3HDM1Q15032 1099 aaKnown RBP31.5■■■□□ 2.63
R3HCC1-202ENST00000411463 TOGARAM1Q9Y4F4 1720 aa31.49■■■□□ 2.63
R3HCC1-202ENST00000411463 PIGBQ92521 554 aa31.49■■■□□ 2.63
R3HCC1-202ENST00000411463 TMOD3Q9NYL9 352 aa31.49■■■□□ 2.63
R3HCC1-202ENST00000411463 MTHFSDQ2M296 383 aaKnown RBP31.48■■■□□ 2.63
R3HCC1-202ENST00000411463 AKAP4Q5JQC9 854 aa31.48■■■□□ 2.63
R3HCC1-202ENST00000411463 ERVV-2B6SEH9 535 aa31.47■■■□□ 2.63
R3HCC1-202ENST00000411463 RSPH6AQ9H0K4 717 aa31.47■■■□□ 2.63
R3HCC1-202ENST00000411463 PRKRIP1Q9H875 184 aaPredicted RBP31.47■■■□□ 2.63
R3HCC1-202ENST00000411463 SLC27A3Q5K4L6 730 aa31.46■■■□□ 2.63
R3HCC1-202ENST00000411463 PRKAR2BP31323 418 aa31.46■■■□□ 2.63
R3HCC1-202ENST00000411463 KDM6AO15550 1401 aaPredicted RBP31.45■■■□□ 2.63
R3HCC1-202ENST00000411463 FCHSD2O94868 740 aa31.45■■■□□ 2.62
R3HCC1-202ENST00000411463 LRRC4BQ9NT99 713 aa31.45■■■□□ 2.62
R3HCC1-202ENST00000411463 SMARCC1Q92922 1105 aaPredicted RBP31.43■■■□□ 2.62
R3HCC1-202ENST00000411463 ANO8Q9HCE9 1232 aaPredicted RBP31.43■■■□□ 2.62
R3HCC1-202ENST00000411463 CABP4P57796 275 aa31.41■■■□□ 2.62
R3HCC1-202ENST00000411463 GAS2L2Q8NHY3 880 aa31.41■■■□□ 2.62
R3HCC1-202ENST00000411463 PHACTR3Q96KR7 559 aa31.41■■■□□ 2.62
R3HCC1-202ENST00000411463 PALLDQ8WX93 1383 aa31.41■■■□□ 2.62
R3HCC1-202ENST00000411463 CCNL1Q9UK58 526 aaPredicted RBP31.4■■■□□ 2.62
R3HCC1-202ENST00000411463 ITGB4P16144 1822 aa31.4■■■□□ 2.62
R3HCC1-202ENST00000411463 KCNQ4P56696 695 aa31.4■■■□□ 2.62
R3HCC1-202ENST00000411463 STK32BQ9NY57 414 aa31.4■■■□□ 2.62
R3HCC1-202ENST00000411463 ASAP1Q9ULH1 1129 aa31.38■■■□□ 2.61
R3HCC1-202ENST00000411463 SLC15A2Q16348 729 aa31.37■■■□□ 2.61
R3HCC1-202ENST00000411463 LGR6Q9HBX8 967 aa31.37■■■□□ 2.61
R3HCC1-202ENST00000411463 NFATC2IPQ8NCF5 419 aa31.36■■■□□ 2.61
R3HCC1-202ENST00000411463 RNMTO43148 476 aaKnown RBP31.35■■■□□ 2.61
R3HCC1-202ENST00000411463 ATG3Q9NT62 314 aa31.35■■■□□ 2.61
R3HCC1-202ENST00000411463 LY75O60449 1722 aa31.35■■■□□ 2.61
R3HCC1-202ENST00000411463 GNAT3A8MTJ3 354 aa31.33■■■□□ 2.61
R3HCC1-202ENST00000411463 MAP3K5Q99683 1374 aa31.33■■■□□ 2.61
R3HCC1-202ENST00000411463 PAPPAQ13219 1627 aa31.32■■■□□ 2.6
R3HCC1-202ENST00000411463 SLC52A2Q9HAB3 445 aa31.32■■■□□ 2.6
R3HCC1-202ENST00000411463 NEFMP07197 916 aa31.31■■■□□ 2.6
R3HCC1-202ENST00000411463 LOC102724428A0A0B4J2F2 783 aa31.3■■■□□ 2.6
R3HCC1-202ENST00000411463 HMGB2P26583 209 aaKnown RBP31.3■■■□□ 2.6
R3HCC1-202ENST00000411463 SIK1P57059 783 aa31.3■■■□□ 2.6
R3HCC1-202ENST00000411463 ZNF827Q17R98 1081 aa31.3■■■□□ 2.6
R3HCC1-202ENST00000411463 PNNQ9H307 717 aaKnown RBP31.3■■■□□ 2.6
R3HCC1-202ENST00000411463 AKT1S1Q96B36 256 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms