RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
RN7SKP228-201ENST00000411042 EYA1Q99502 592 aa13.65□□□□□ -0.22
RN7SKP228-201ENST00000411042 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
RN7SKP228-201ENST00000411042 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP228-201ENST00000411042 IRX6P78412 446 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP228-201ENST00000411042 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP228-201ENST00000411042 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
RN7SKP228-201ENST00000411042 PXDNQ92626 1479 aa13.63□□□□□ -0.23
RN7SKP228-201ENST00000411042 SOCS7O14512 581 aa13.63□□□□□ -0.23
RN7SKP228-201ENST00000411042 CCDC136Q96JN2 1154 aa13.63□□□□□ -0.23
RN7SKP228-201ENST00000411042 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
RN7SKP228-201ENST00000411042 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
RN7SKP228-201ENST00000411042 TAOK2Q9UL54 1235 aa13.62□□□□□ -0.23
RN7SKP228-201ENST00000411042 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP228-201ENST00000411042 CPDO75976 1380 aa13.61□□□□□ -0.23
RN7SKP228-201ENST00000411042 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP228-201ENST00000411042 KIAA0232Q92628 1395 aa13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
RN7SKP228-201ENST00000411042 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 CHL1O00533 1208 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 EXOC6Q8TAG9 804 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
RN7SKP228-201ENST00000411042 SOX12O15370 315 aa13.58□□□□□ -0.24
RN7SKP228-201ENST00000411042 BCAR3O75815 825 aa13.58□□□□□ -0.24
RN7SKP228-201ENST00000411042 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
RN7SKP228-201ENST00000411042 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
RN7SKP228-201ENST00000411042 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
RN7SKP228-201ENST00000411042 RGL2O15211 777 aa13.57□□□□□ -0.24
RN7SKP228-201ENST00000411042 PLIN1O60240 522 aa13.57□□□□□ -0.24
RN7SKP228-201ENST00000411042 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
RN7SKP228-201ENST00000411042 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 CRB1P82279 1406 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 DSG3P32926 999 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 B4GALNT3Q6L9W6 998 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
RN7SKP228-201ENST00000411042 VAMP4O75379 141 aa13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 CHMP4BQ9H444 224 aaKnown RBP13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 COL18A1P39060 1754 aa13.55□□□□□ -0.24
RN7SKP228-201ENST00000411042 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 ERBB3P21860 1342 aa13.54□□□□□ -0.24
RN7SKP228-201ENST00000411042 LTBP4Q8N2S1 1624 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
RN7SKP228-201ENST00000411042 CACNA1FO60840 1977 aa13.52□□□□□ -0.24
RN7SKP228-201ENST00000411042 UBAP1LF5GYI3 381 aa13.52□□□□□ -0.25
RN7SKP228-201ENST00000411042 ATF7IPQ6VMQ6 1270 aa13.52□□□□□ -0.25
RN7SKP228-201ENST00000411042 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.25
RN7SKP228-201ENST00000411042 TWISTNBQ3B726 338 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP228-201ENST00000411042 AKAP4Q5JQC9 854 aa13.51□□□□□ -0.25
RN7SKP228-201ENST00000411042 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
RN7SKP228-201ENST00000411042 FAM83GA6ND36 823 aa13.5□□□□□ -0.25
RN7SKP228-201ENST00000411042 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP228-201ENST00000411042 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP228-201ENST00000411042 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
RN7SKP228-201ENST00000411042 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 HOXB7P09629 217 aa13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 MCM10Q7L590 875 aa13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 LTV1Q96GA3 475 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 THUMPD2Q9BTF0 503 aaKnown RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 DDX19BQ9UMR2 479 aa13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
RN7SKP228-201ENST00000411042 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
RN7SKP228-201ENST00000411042 AHDC1Q5TGY3 1603 aaPredicted RBP13.48□□□□□ -0.25
RN7SKP228-201ENST00000411042 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 TRIM27P14373 513 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms