RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
CCDC148-203ENST00000409889 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
CCDC148-203ENST00000409889 NSD2O96028 1365 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 ANKRD36BQ8N2N9 1353 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 APLP1P51693 650 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
CCDC148-203ENST00000409889 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
CCDC148-203ENST00000409889 ANKRD24Q8TF21 1146 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 CD2APQ9Y5K6 639 aa15.29■□□□□ 0.04
CCDC148-203ENST00000409889 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
CCDC148-203ENST00000409889 KIF3CO14782 793 aa15.28■□□□□ 0.04
CCDC148-203ENST00000409889 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
CCDC148-203ENST00000409889 WDR90Q96KV7 1748 aa15.28■□□□□ 0.04
CCDC148-203ENST00000409889 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.03
CCDC148-203ENST00000409889 PRIM1P49642 420 aaKnown RBP15.26■□□□□ 0.03
CCDC148-203ENST00000409889 USP31Q70CQ4 1352 aa15.25■□□□□ 0.03
CCDC148-203ENST00000409889 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
CCDC148-203ENST00000409889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCDC148-203ENST00000409889 DNAJC5GQ8N7S2 189 aa15.24■□□□□ 0.03
CCDC148-203ENST00000409889 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
CCDC148-203ENST00000409889 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
CCDC148-203ENST00000409889 CAPN15O75808 1086 aa15.23■□□□□ 0.03
CCDC148-203ENST00000409889 RGPD2P0DJD1 1756 aa15.23■□□□□ 0.03
CCDC148-203ENST00000409889 USP47Q96K76 1375 aa15.23■□□□□ 0.03
CCDC148-203ENST00000409889 HOXD11P31277 338 aaPredicted RBP15.22■□□□□ 0.03
CCDC148-203ENST00000409889 TOGARAM1Q9Y4F4 1720 aa15.22■□□□□ 0.03
CCDC148-203ENST00000409889 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
CCDC148-203ENST00000409889 NME9Q86XW9 330 aa15.21■□□□□ 0.03
CCDC148-203ENST00000409889 C4BP0C0L5 1744 aa15.2■□□□□ 0.02
CCDC148-203ENST00000409889 TOMM70O94826 608 aa15.2■□□□□ 0.02
CCDC148-203ENST00000409889 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
CCDC148-203ENST00000409889 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
CCDC148-203ENST00000409889 SBNO2Q9Y2G9 1366 aa15.19■□□□□ 0.02
CCDC148-203ENST00000409889 MEGF6O75095 1541 aa15.18■□□□□ 0.02
CCDC148-203ENST00000409889 FLAD1Q8NFF5 587 aa15.18■□□□□ 0.02
CCDC148-203ENST00000409889 LTV1Q96GA3 475 aaPredicted RBP15.18■□□□□ 0.02
CCDC148-203ENST00000409889 CD163L1Q9NR16 1453 aa15.18■□□□□ 0.02
CCDC148-203ENST00000409889 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
CCDC148-203ENST00000409889 IP6K1Q92551 441 aa15.16■□□□□ 0.02
CCDC148-203ENST00000409889 KIAA1551Q9HCM1 1747 aa15.15■□□□□ 0.02
CCDC148-203ENST00000409889 TNS4Q8IZW8 715 aa15.15■□□□□ 0.02
CCDC148-203ENST00000409889 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
CCDC148-203ENST00000409889 N4BP2Q86UW6 1770 aaPredicted RBP15.15■□□□□ 0.02
CCDC148-203ENST00000409889 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
CCDC148-203ENST00000409889 PRELPP51888 382 aa15.14■□□□□ 0.01
CCDC148-203ENST00000409889 HTRA3P83110 453 aa15.14■□□□□ 0.01
CCDC148-203ENST00000409889 ITGB4P16144 1822 aa15.14■□□□□ 0.01
CCDC148-203ENST00000409889 EDC4Q6P2E9 1401 aaKnown RBP15.14■□□□□ 0.01
CCDC148-203ENST00000409889 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
CCDC148-203ENST00000409889 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
CCDC148-203ENST00000409889 JMYQ8N9B5 988 aa15.13■□□□□ 0.01
CCDC148-203ENST00000409889 AK7Q96M32 723 aa15.13■□□□□ 0.01
CCDC148-203ENST00000409889 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
CCDC148-203ENST00000409889 PHF14O94880 888 aa15.12■□□□□ 0.01
CCDC148-203ENST00000409889 AMIGO3Q86WK7 504 aa15.12■□□□□ 0.01
CCDC148-203ENST00000409889 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
CCDC148-203ENST00000409889 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
CCDC148-203ENST00000409889 RBM46Q8TBY0 533 aaKnown RBP15.11■□□□□ 0.01
CCDC148-203ENST00000409889 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
CCDC148-203ENST00000409889 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
CCDC148-203ENST00000409889 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
CCDC148-203ENST00000409889 HDGFL2Q7Z4V5 671 aaPredicted RBP15.1■□□□□ 0.01
CCDC148-203ENST00000409889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
CCDC148-203ENST00000409889 HOXC9P31274 260 aa15.09■□□□□ 0.01
CCDC148-203ENST00000409889 SMIM5Q71RC9 77 aa15.09■□□□□ 0.01
CCDC148-203ENST00000409889 C16orf71Q8IYS4 520 aaPredicted RBP15.09■□□□□ 0.01
CCDC148-203ENST00000409889 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
CCDC148-203ENST00000409889 A0A1W2PP64 1363 aa15.09■□□□□ 0.01
CCDC148-203ENST00000409889 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0.01
CCDC148-203ENST00000409889 KCNA4P22459 653 aa15.08■□□□□ 0
CCDC148-203ENST00000409889 MAP3K19Q56UN5 1328 aa15.08■□□□□ 0
CCDC148-203ENST00000409889 TNRC6CQ9HCJ0 1690 aaKnown RBP15.07■□□□□ 0
CCDC148-203ENST00000409889 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
CCDC148-203ENST00000409889 SSFA2P28290 1259 aa15.07■□□□□ 0
CCDC148-203ENST00000409889 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
CCDC148-203ENST00000409889 BCS1LQ9Y276 419 aa15.07■□□□□ 0
CCDC148-203ENST00000409889 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
CCDC148-203ENST00000409889 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
CCDC148-203ENST00000409889 AMPHP49418 695 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 FSTL1Q12841 308 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
CCDC148-203ENST00000409889 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
CCDC148-203ENST00000409889 RAPGEF4Q8WZA2 1011 aa15.05■□□□□ -0
CCDC148-203ENST00000409889 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
CCDC148-203ENST00000409889 KCPQ6ZWJ8 1503 aa15.04■□□□□ -0
CCDC148-203ENST00000409889 RTL1A6NKG5 1358 aa15.04■□□□□ -0
CCDC148-203ENST00000409889 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
CCDC148-203ENST00000409889 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
CCDC148-203ENST00000409889 NBPF4Q96M43 638 aa15.04■□□□□ -0
CCDC148-203ENST00000409889 TERF2IPQ9NYB0 399 aa15.04■□□□□ -0
CCDC148-203ENST00000409889 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
CCDC148-203ENST00000409889 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
CCDC148-203ENST00000409889 MMP10P09238 476 aa15.03■□□□□ -0
CCDC148-203ENST00000409889 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
CCDC148-203ENST00000409889 FBLN1P23142 703 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms