RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 IGSF1Q8N6C5 1336 aa14.72□□□□□ -0.05
CHMP3-205ENST00000409810 TRIM37O94972 964 aa14.72□□□□□ -0.05
CHMP3-205ENST00000409810 NHSQ6T4R5 1651 aa14.71□□□□□ -0.05
CHMP3-205ENST00000409810 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
CHMP3-205ENST00000409810 PCDH11XQ9BZA7 1347 aa14.7□□□□□ -0.06
CHMP3-205ENST00000409810 PCDH11YQ9BZA8 1340 aa14.7□□□□□ -0.06
CHMP3-205ENST00000409810 RGPD3A6NKT7 1758 aaPredicted RBP14.7□□□□□ -0.06
CHMP3-205ENST00000409810 RGPD4Q7Z3J3 1758 aa14.7□□□□□ -0.06
CHMP3-205ENST00000409810 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
CHMP3-205ENST00000409810 IL13P35225 146 aa14.69□□□□□ -0.06
CHMP3-205ENST00000409810 DDX54Q8TDD1 881 aaKnown RBP14.69□□□□□ -0.06
CHMP3-205ENST00000409810 SPG7Q9UQ90 795 aa14.69□□□□□ -0.06
CHMP3-205ENST00000409810 PARD3Q8TEW0 1356 aa14.69□□□□□ -0.06
CHMP3-205ENST00000409810 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
CHMP3-205ENST00000409810 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-205ENST00000409810 COL3A1P02461 1466 aaPredicted RBP14.68□□□□□ -0.06
CHMP3-205ENST00000409810 APBA3O96018 575 aa14.67□□□□□ -0.06
CHMP3-205ENST00000409810 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
CHMP3-205ENST00000409810 RALBP1Q15311 655 aa14.67□□□□□ -0.06
CHMP3-205ENST00000409810 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
CHMP3-205ENST00000409810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■□□ 16.1
CHMP3-205ENST00000409810 KDRP35968 1356 aa14.66□□□□□ -0.06
CHMP3-205ENST00000409810 DEFB132Q7Z7B7 95 aa14.66□□□□□ -0.06
CHMP3-205ENST00000409810 BTAF1O14981 1849 aa14.66□□□□□ -0.06
CHMP3-205ENST00000409810 SULT6B1Q6IMI4 303 aa14.65□□□□□ -0.06
CHMP3-205ENST00000409810 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
CHMP3-205ENST00000409810 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-205ENST00000409810 AMOTQ4VCS5 1084 aa14.64□□□□□ -0.07
CHMP3-205ENST00000409810 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
CHMP3-205ENST00000409810 ACSBG1Q96GR2 724 aa14.64□□□□□ -0.07
CHMP3-205ENST00000409810 RREB1Q92766 1687 aa14.64□□□□□ -0.07
CHMP3-205ENST00000409810 AEBP1Q8IUX7 1158 aa14.63□□□□□ -0.07
CHMP3-205ENST00000409810 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
CHMP3-205ENST00000409810 ITGB4P16144 1822 aa14.63□□□□□ -0.07
CHMP3-205ENST00000409810 U2SURPO15042 1029 aaKnown RBP14.62□□□□□ -0.07
CHMP3-205ENST00000409810 PLSCR1O15162 318 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 CYP27B1O15528 508 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 HSP90AB1P08238 724 aaKnown RBP14.61□□□□□ -0.07
CHMP3-205ENST00000409810 HMOX1P09601 288 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 SYTL4Q96C24 671 aaPredicted RBP14.61□□□□□ -0.07
CHMP3-205ENST00000409810 CAMKK2Q96RR4 588 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
CHMP3-205ENST00000409810 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
CHMP3-205ENST00000409810 KCNQ2O43526 872 aa14.6□□□□□ -0.07
CHMP3-205ENST00000409810 PHKG2P15735 406 aa14.6□□□□□ -0.07
CHMP3-205ENST00000409810 EZH2Q15910 746 aaKnown RBP14.6□□□□□ -0.07
CHMP3-205ENST00000409810 C1orf141Q5JVX7 400 aa14.6□□□□□ -0.07
CHMP3-205ENST00000409810 MYBBP1AQ9BQG0 1328 aaKnown RBP14.6□□□□□ -0.07
CHMP3-205ENST00000409810 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
CHMP3-205ENST00000409810 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
CHMP3-205ENST00000409810 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
CHMP3-205ENST00000409810 PTF1AQ7RTS3 328 aa14.58□□□□□ -0.08
CHMP3-205ENST00000409810 U2AF1L5P0DN76 240 aaPredicted RBP14.57□□□□□ -0.08
CHMP3-205ENST00000409810 U2AF1Q01081 240 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHMP3-205ENST00000409810 LY75O60449 1722 aa14.57□□□□□ -0.08
CHMP3-205ENST00000409810 SCN11AQ9UI33 1791 aa14.57□□□□□ -0.08
CHMP3-205ENST00000409810 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
CHMP3-205ENST00000409810 PRKRIP1Q9H875 184 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-205ENST00000409810 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
CHMP3-205ENST00000409810 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
CHMP3-205ENST00000409810 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
CHMP3-205ENST00000409810 GAS2L2Q8NHY3 880 aa14.55□□□□□ -0.08
CHMP3-205ENST00000409810 FCHSD2O94868 740 aa14.54□□□□□ -0.08
CHMP3-205ENST00000409810 NEFMP07197 916 aa14.54□□□□□ -0.08
CHMP3-205ENST00000409810 TXNRD1Q16881 649 aa14.54□□□□□ -0.08
CHMP3-205ENST00000409810 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
CHMP3-205ENST00000409810 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
CHMP3-205ENST00000409810 ERVV-2B6SEH9 535 aa14.53□□□□□ -0.08
CHMP3-205ENST00000409810 HMGB2P26583 209 aaKnown RBP14.53□□□□□ -0.08
CHMP3-205ENST00000409810 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
CHMP3-205ENST00000409810 PNNQ9H307 717 aaKnown RBP14.53□□□□□ -0.08
CHMP3-205ENST00000409810 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.08
CHMP3-205ENST00000409810 MTHFSDQ2M296 383 aaKnown RBP14.52□□□□□ -0.09
CHMP3-205ENST00000409810 SLC27A3Q5K4L6 730 aa14.52□□□□□ -0.09
CHMP3-205ENST00000409810 SMARCC1Q92922 1105 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-205ENST00000409810 ANP32CO43423 234 aa14.51□□□□□ -0.09
CHMP3-205ENST00000409810 ADAMTS7Q9UKP4 1686 aa14.51□□□□□ -0.09
CHMP3-205ENST00000409810 PALLDQ8WX93 1383 aa14.5□□□□□ -0.09
CHMP3-205ENST00000409810 MAP3K5Q99683 1374 aa14.5□□□□□ -0.09
CHMP3-205ENST00000409810 CABP4P57796 275 aa14.5□□□□□ -0.09
CHMP3-205ENST00000409810 PIGBQ92521 554 aa14.5□□□□□ -0.09
CHMP3-205ENST00000409810 PAPPAQ13219 1627 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 PROM2Q8N271 834 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 TAF1LQ8IZX4 1826 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 MRC1P22897 1456 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 C5P01031 1676 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
CHMP3-205ENST00000409810 MAPK8IP3Q9UPT6 1336 aa14.48□□□□□ -0.09
CHMP3-205ENST00000409810 GNAT3A8MTJ3 354 aa14.48□□□□□ -0.09
CHMP3-205ENST00000409810 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
CHMP3-205ENST00000409810 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP3-205ENST00000409810 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
CHMP3-205ENST00000409810 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
CHMP3-205ENST00000409810 R3HDM1Q15032 1099 aaKnown RBP14.47□□□□□ -0.09
CHMP3-205ENST00000409810 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.09
CHMP3-205ENST00000409810 PSDA5PKW4 1024 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-205ENST00000409810 PHACTR3Q96KR7 559 aa14.46□□□□□ -0.09
CHMP3-205ENST00000409810 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
CHMP3-205ENST00000409810 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms