RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 KDRP35968 1356 aa25.1■■□□□ 1.61
LIMS2-207ENST00000409808 ARHGEF25Q86VW2 580 aa25.1■■□□□ 1.61
LIMS2-207ENST00000409808 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
LIMS2-207ENST00000409808 CABLES1Q8TDN4 633 aa25.08■■□□□ 1.61
LIMS2-207ENST00000409808 MED1Q15648 1581 aaPredicted RBP25.08■■□□□ 1.61
LIMS2-207ENST00000409808 ZC3H6P61129 1189 aaKnown RBP25.08■■□□□ 1.61
LIMS2-207ENST00000409808 BECN1Q14457 450 aa25.07■■□□□ 1.6
LIMS2-207ENST00000409808 MTHFSDQ2M296 383 aaKnown RBP25.07■■□□□ 1.6
LIMS2-207ENST00000409808 PXDNQ92626 1479 aa25.07■■□□□ 1.6
LIMS2-207ENST00000409808 RGPD2P0DJD1 1756 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 MCM10Q7L590 875 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 PCDHB15Q9Y5E8 787 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 LMOD3Q0VAK6 560 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 NBPF6Q5VWK0 638 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 ZKSCAN2Q63HK3 967 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 LRRC59Q96AG4 307 aaKnown RBP25.06■■□□□ 1.6
LIMS2-207ENST00000409808 NBPF4Q96M43 638 aa25.06■■□□□ 1.6
LIMS2-207ENST00000409808 RLBP1P12271 317 aa25.05■■□□□ 1.6
LIMS2-207ENST00000409808 AXIN2Q9Y2T1 843 aa25.05■■□□□ 1.6
LIMS2-207ENST00000409808 PHRF1Q9P1Y6 1649 aaKnown RBP25.04■■□□□ 1.6
LIMS2-207ENST00000409808 MVPQ14764 893 aaKnown RBP25.04■■□□□ 1.6
LIMS2-207ENST00000409808 UPF2Q9HAU5 1272 aaKnown RBP25.03■■□□□ 1.6
LIMS2-207ENST00000409808 TNS3Q68CZ2 1445 aa25.03■■□□□ 1.6
LIMS2-207ENST00000409808 SPATA31A3Q5VYP0 1347 aa25.03■■□□□ 1.6
LIMS2-207ENST00000409808 MBIPQ9NS73 344 aa25.02■■□□□ 1.6
LIMS2-207ENST00000409808 RGPD5Q99666 1765 aa25.02■■□□□ 1.6
LIMS2-207ENST00000409808 ZNF853P0CG23 659 aa25.02■■□□□ 1.6
LIMS2-207ENST00000409808 CALD1Q05682 793 aaKnown RBP25.02■■□□□ 1.6
LIMS2-207ENST00000409808 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
LIMS2-207ENST00000409808 GNAI1P63096 354 aa25.01■■□□□ 1.59
LIMS2-207ENST00000409808 PDZRN3Q9UPQ7 1066 aa25.01■■□□□ 1.59
LIMS2-207ENST00000409808 DZIP1LQ8IYY4 767 aaKnown RBP25.01■■□□□ 1.59
LIMS2-207ENST00000409808 TNNQ9UQP3 1299 aa25.01■■□□□ 1.59
LIMS2-207ENST00000409808 CFAP44Q96MT7 982 aa25■■□□□ 1.59
LIMS2-207ENST00000409808 ANKRD24Q8TF21 1146 aa24.99■■□□□ 1.59
LIMS2-207ENST00000409808 TSPYL6Q8N831 410 aa24.98■■□□□ 1.59
LIMS2-207ENST00000409808 SSH1Q8WYL5 1049 aa24.98■■□□□ 1.59
LIMS2-207ENST00000409808 ELL2O00472 640 aaPredicted RBP24.97■■□□□ 1.59
LIMS2-207ENST00000409808 SEC24BO95487 1268 aa24.97■■□□□ 1.59
LIMS2-207ENST00000409808 FTSJ3Q8IY81 847 aaKnown RBP24.97■■□□□ 1.59
LIMS2-207ENST00000409808 SMC4Q9NTJ3 1288 aa24.96■■□□□ 1.59
LIMS2-207ENST00000409808 GAS2L2Q8NHY3 880 aa24.96■■□□□ 1.59
LIMS2-207ENST00000409808 CHRNA2Q15822 529 aa24.95■■□□□ 1.58
LIMS2-207ENST00000409808 RTF1Q92541 710 aaKnown RBP24.94■■□□□ 1.58
LIMS2-207ENST00000409808 TBC1D32Q96NH3 1257 aa24.94■■□□□ 1.58
LIMS2-207ENST00000409808 DDX19BQ9UMR2 479 aa24.94■■□□□ 1.58
LIMS2-207ENST00000409808 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
LIMS2-207ENST00000409808 CRYBG1Q9Y4K1 1723 aa24.94■■□□□ 1.58
LIMS2-207ENST00000409808 FRAT2O75474 233 aaPredicted RBP24.94■■□□□ 1.58
LIMS2-207ENST00000409808 HDAC1Q13547 482 aaPredicted RBP24.94■■□□□ 1.58
LIMS2-207ENST00000409808 C8orf58Q8NAV2 365 aa24.94■■□□□ 1.58
LIMS2-207ENST00000409808 MIS18AQ9NYP9 233 aa24.94■■□□□ 1.58
LIMS2-207ENST00000409808 CRB1P82279 1406 aa24.92■■□□□ 1.58
LIMS2-207ENST00000409808 VAMP4O75379 141 aa24.92■■□□□ 1.58
LIMS2-207ENST00000409808 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
LIMS2-207ENST00000409808 GNAT3A8MTJ3 354 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 CHL1O00533 1208 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 ATF7IPQ6VMQ6 1270 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 ERBB3P21860 1342 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 KIAA0232Q92628 1395 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 COL18A1P39060 1754 aa24.9■■□□□ 1.58
LIMS2-207ENST00000409808 IPO8O15397 1037 aaKnown RBP24.89■■□□□ 1.58
LIMS2-207ENST00000409808 TRIM27P14373 513 aa24.88■■□□□ 1.57
LIMS2-207ENST00000409808 TWISTNBQ3B726 338 aaPredicted RBP24.88■■□□□ 1.57
LIMS2-207ENST00000409808 NOB1Q9ULX3 412 aaKnown RBP24.88■■□□□ 1.57
LIMS2-207ENST00000409808 IL17REQ8NFR9 667 aa24.87■■□□□ 1.57
LIMS2-207ENST00000409808 MAP3K5Q99683 1374 aa24.87■■□□□ 1.57
LIMS2-207ENST00000409808 PRKCSHP14314 528 aaPredicted RBP24.87■■□□□ 1.57
LIMS2-207ENST00000409808 ZNF428Q96B54 188 aa24.87■■□□□ 1.57
LIMS2-207ENST00000409808 KIF16BQ96L93 1317 aa24.86■■□□□ 1.57
LIMS2-207ENST00000409808 ALDH1L2Q3SY69 923 aa24.86■■□□□ 1.57
LIMS2-207ENST00000409808 IL27Q8NEV9 243 aa24.86■■□□□ 1.57
LIMS2-207ENST00000409808 NHSL1Q5SYE7 1610 aa24.85■■□□□ 1.57
LIMS2-207ENST00000409808 NLRP2Q9NX02 1062 aa24.85■■□□□ 1.57
LIMS2-207ENST00000409808 NCAPD2Q15021 1401 aa24.84■■□□□ 1.57
LIMS2-207ENST00000409808 HTATSF1O43719 755 aaKnown RBP24.84■■□□□ 1.57
LIMS2-207ENST00000409808 LTBP4Q8N2S1 1624 aa24.84■■□□□ 1.57
LIMS2-207ENST00000409808 CAMTA1Q9Y6Y1 1673 aa24.83■■□□□ 1.57
LIMS2-207ENST00000409808 SMC5Q8IY18 1101 aa24.83■■□□□ 1.57
LIMS2-207ENST00000409808 TSPYL4Q9UJ04 414 aa24.83■■□□□ 1.57
LIMS2-207ENST00000409808 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.56
LIMS2-207ENST00000409808 ANTXR1Q9H6X2 564 aa24.83■■□□□ 1.56
LIMS2-207ENST00000409808 CSB-PGBD3P0DP91 1061 aa24.82■■□□□ 1.56
LIMS2-207ENST00000409808 ITPRIPQ8IWB1 547 aa24.82■■□□□ 1.56
LIMS2-207ENST00000409808 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
LIMS2-207ENST00000409808 ZNF530Q6P9A1 599 aaPredicted RBP24.81■■□□□ 1.56
LIMS2-207ENST00000409808 MRPL50Q8N5N7 158 aaKnown RBP24.81■■□□□ 1.56
LIMS2-207ENST00000409808 LGR6Q9HBX8 967 aa24.81■■□□□ 1.56
LIMS2-207ENST00000409808 CPDO75976 1380 aa24.81■■□□□ 1.56
LIMS2-207ENST00000409808 LRRC37A3O60309 1634 aa24.81■■□□□ 1.56
LIMS2-207ENST00000409808 PLEKHO1Q53GL0 409 aaPredicted RBP24.81■■□□□ 1.56
LIMS2-207ENST00000409808 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
LIMS2-207ENST00000409808 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
LIMS2-207ENST00000409808 ZBTB40Q9NUA8 1239 aa24.8■■□□□ 1.56
LIMS2-207ENST00000409808 TBC1D2Q9BYX2 928 aa24.79■■□□□ 1.56
LIMS2-207ENST00000409808 LMO7Q8WWI1 1683 aa24.79■■□□□ 1.56
LIMS2-207ENST00000409808 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
LIMS2-207ENST00000409808 ABCA3Q99758 1704 aa24.78■■□□□ 1.56
LIMS2-207ENST00000409808 MPRIPQ6WCQ1 1025 aa24.78■■□□□ 1.56
LIMS2-207ENST00000409808 TMEM57Q8N5G2 664 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms