RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 BCAR3O75815 825 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 GNAI1P63096 354 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 TOM1L2Q6ZVM7 507 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
CHMP3-204ENST00000409727 EVA1CP58658 441 aa16.13■□□□□ 0.17
CHMP3-204ENST00000409727 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
CHMP3-204ENST00000409727 RAPGEF4Q8WZA2 1011 aa16.13■□□□□ 0.17
CHMP3-204ENST00000409727 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
CHMP3-204ENST00000409727 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
CHMP3-204ENST00000409727 LMO7Q8WWI1 1683 aa16.13■□□□□ 0.17
CHMP3-204ENST00000409727 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-204ENST00000409727 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-204ENST00000409727 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-204ENST00000409727 ADAMTS2O95450 1211 aa16.12■□□□□ 0.17
CHMP3-204ENST00000409727 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-204ENST00000409727 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-204ENST00000409727 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
CHMP3-204ENST00000409727 WDR17Q8IZU2 1322 aa16.12■□□□□ 0.17
CHMP3-204ENST00000409727 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
CHMP3-204ENST00000409727 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
CHMP3-204ENST00000409727 COL22A1Q8NFW1 1626 aaPredicted RBP16.11■□□□□ 0.17
CHMP3-204ENST00000409727 BTG4Q9NY30 223 aa16.11■□□□□ 0.17
CHMP3-204ENST00000409727 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
CHMP3-204ENST00000409727 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
CHMP3-204ENST00000409727 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
CHMP3-204ENST00000409727 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 CRB1P82279 1406 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
CHMP3-204ENST00000409727 RARSP54136 660 aaKnown RBP16.1■□□□□ 0.17
CHMP3-204ENST00000409727 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
CHMP3-204ENST00000409727 MEGF6O75095 1541 aa16.09■□□□□ 0.17
CHMP3-204ENST00000409727 HTATSF1O43719 755 aaKnown RBP16.09■□□□□ 0.17
CHMP3-204ENST00000409727 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.17
CHMP3-204ENST00000409727 FRAT1Q92837 279 aaPredicted RBP16.08■□□□□ 0.17
CHMP3-204ENST00000409727 LGR6Q9HBX8 967 aa16.08■□□□□ 0.17
CHMP3-204ENST00000409727 CHL1O00533 1208 aa16.08■□□□□ 0.16
CHMP3-204ENST00000409727 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
CHMP3-204ENST00000409727 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
CHMP3-204ENST00000409727 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.16
CHMP3-204ENST00000409727 TSPYL6Q8N831 410 aa16.08■□□□□ 0.16
CHMP3-204ENST00000409727 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
CHMP3-204ENST00000409727 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
CHMP3-204ENST00000409727 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
CHMP3-204ENST00000409727 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
CHMP3-204ENST00000409727 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
CHMP3-204ENST00000409727 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
CHMP3-204ENST00000409727 KCNA4P22459 653 aa16.05■□□□□ 0.16
CHMP3-204ENST00000409727 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
CHMP3-204ENST00000409727 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
CHMP3-204ENST00000409727 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
CHMP3-204ENST00000409727 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
CHMP3-204ENST00000409727 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
CHMP3-204ENST00000409727 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
CHMP3-204ENST00000409727 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-204ENST00000409727 SSH1Q8WYL5 1049 aa16.04■□□□□ 0.16
CHMP3-204ENST00000409727 VAMP4O75379 141 aa16.03■□□□□ 0.16
CHMP3-204ENST00000409727 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
CHMP3-204ENST00000409727 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
CHMP3-204ENST00000409727 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-204ENST00000409727 CEMIPQ8WUJ3 1361 aa16.02■□□□□ 0.16
CHMP3-204ENST00000409727 IL2RBP14784 551 aa16.02■□□□□ 0.16
CHMP3-204ENST00000409727 TEFQ10587 303 aa16.02■□□□□ 0.16
CHMP3-204ENST00000409727 ERICH6BQ5W0A0 696 aa16.02■□□□□ 0.16
CHMP3-204ENST00000409727 PHKG2P15735 406 aa16.01■□□□□ 0.15
CHMP3-204ENST00000409727 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
CHMP3-204ENST00000409727 JCADQ9P266 1359 aa16.01■□□□□ 0.15
CHMP3-204ENST00000409727 OVOS2A0A0G2JMS6 1433 aa16.01■□□□□ 0.15
CHMP3-204ENST00000409727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■□□ 16.1
CHMP3-204ENST00000409727 CYP27B1O15528 508 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 HSPA1LP34931 641 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 TNNQ9UQP3 1299 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 PLCH1Q4KWH8 1693 aa16■□□□□ 0.15
CHMP3-204ENST00000409727 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CHMP3-204ENST00000409727 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
CHMP3-204ENST00000409727 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
CHMP3-204ENST00000409727 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
CHMP3-204ENST00000409727 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
CHMP3-204ENST00000409727 DDX54Q8TDD1 881 aaKnown RBP15.99■□□□□ 0.15
CHMP3-204ENST00000409727 C8orf37Q96NL8 207 aa15.99■□□□□ 0.15
CHMP3-204ENST00000409727 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
CHMP3-204ENST00000409727 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
CHMP3-204ENST00000409727 ALDH1L2Q3SY69 923 aa15.98■□□□□ 0.15
CHMP3-204ENST00000409727 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-204ENST00000409727 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
CHMP3-204ENST00000409727 KCNQ3O43525 872 aa15.97■□□□□ 0.15
CHMP3-204ENST00000409727 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
CHMP3-204ENST00000409727 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
CHMP3-204ENST00000409727 CCDC9Q9Y3X0 531 aaKnown RBP15.97■□□□□ 0.15
CHMP3-204ENST00000409727 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
CHMP3-204ENST00000409727 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
CHMP3-204ENST00000409727 NGLY1Q96IV0 654 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms