RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
NIF3L1-205ENST00000409588 MYCNP04198 464 aaPredicted RBP20.02■□□□□ 0.8
NIF3L1-205ENST00000409588 ZCRB1Q8TBF4 217 aaKnown RBP20.01■□□□□ 0.79
NIF3L1-205ENST00000409588 POLR3GLQ9BT43 218 aa20.01■□□□□ 0.79
NIF3L1-205ENST00000409588 HSP90AB2PQ58FF8 381 aa20■□□□□ 0.79
NIF3L1-205ENST00000409588 NBPF6Q5VWK0 638 aa20■□□□□ 0.79
NIF3L1-205ENST00000409588 RAPGEF4Q8WZA2 1011 aa20■□□□□ 0.79
NIF3L1-205ENST00000409588 NBPF4Q96M43 638 aa20■□□□□ 0.79
NIF3L1-205ENST00000409588 RREB1Q92766 1687 aa20■□□□□ 0.79
NIF3L1-205ENST00000409588 TXNRD1Q16881 649 aa19.99■□□□□ 0.79
NIF3L1-205ENST00000409588 PROM2Q8N271 834 aa19.99■□□□□ 0.79
NIF3L1-205ENST00000409588 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
NIF3L1-205ENST00000409588 MYOM1P52179 1685 aa19.99■□□□□ 0.79
NIF3L1-205ENST00000409588 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
NIF3L1-205ENST00000409588 LRP5O75197 1615 aa19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 KCNQ2O43526 872 aa19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 HMGB2P26583 209 aaKnown RBP19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 PANK3Q9H999 370 aa19.98■□□□□ 0.79
NIF3L1-205ENST00000409588 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
NIF3L1-205ENST00000409588 ACSBG1Q96GR2 724 aa19.96■□□□□ 0.79
NIF3L1-205ENST00000409588 NSD2O96028 1365 aa19.95■□□□□ 0.79
NIF3L1-205ENST00000409588 NUP188Q5SRE5 1749 aa19.95■□□□□ 0.78
NIF3L1-205ENST00000409588 POLA2Q14181 598 aa19.94■□□□□ 0.78
NIF3L1-205ENST00000409588 STK32BQ9NY57 414 aa19.94■□□□□ 0.78
NIF3L1-205ENST00000409588 EMILIN1Q9Y6C2 1016 aa19.94■□□□□ 0.78
NIF3L1-205ENST00000409588 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
NIF3L1-205ENST00000409588 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
NIF3L1-205ENST00000409588 POLKQ9UBT6 870 aa19.93■□□□□ 0.78
NIF3L1-205ENST00000409588 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
NIF3L1-205ENST00000409588 NHSQ6T4R5 1651 aa19.92■□□□□ 0.78
NIF3L1-205ENST00000409588 SLC27A3Q5K4L6 730 aa19.92■□□□□ 0.78
NIF3L1-205ENST00000409588 SLC15A2Q16348 729 aa19.91■□□□□ 0.78
NIF3L1-205ENST00000409588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.91■□□□□ 0.78
NIF3L1-205ENST00000409588 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
NIF3L1-205ENST00000409588 RBM42Q9BTD8 480 aaKnown RBP19.9■□□□□ 0.78
NIF3L1-205ENST00000409588 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
NIF3L1-205ENST00000409588 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
NIF3L1-205ENST00000409588 PLEKHG2Q9H7P9 1386 aa19.89■□□□□ 0.77
NIF3L1-205ENST00000409588 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
NIF3L1-205ENST00000409588 MEGF6O75095 1541 aa19.88■□□□□ 0.77
NIF3L1-205ENST00000409588 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
NIF3L1-205ENST00000409588 SYTL4Q96C24 671 aaPredicted RBP19.88■□□□□ 0.77
NIF3L1-205ENST00000409588 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
NIF3L1-205ENST00000409588 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
NIF3L1-205ENST00000409588 EYA1Q99502 592 aa19.86■□□□□ 0.77
NIF3L1-205ENST00000409588 ANO8Q9HCE9 1232 aaPredicted RBP19.86■□□□□ 0.77
NIF3L1-205ENST00000409588 MAP2P11137 1827 aaKnown RBP19.86■□□□□ 0.77
NIF3L1-205ENST00000409588 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
NIF3L1-205ENST00000409588 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
NIF3L1-205ENST00000409588 KIF7Q2M1P5 1343 aa19.84■□□□□ 0.77
NIF3L1-205ENST00000409588 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
NIF3L1-205ENST00000409588 NKX1-1Q15270 411 aaPredicted RBP19.84■□□□□ 0.77
NIF3L1-205ENST00000409588 ANKRD26Q9UPS8 1709 aa19.84■□□□□ 0.77
NIF3L1-205ENST00000409588 PPP1R1BQ9UD71 204 aaPredicted RBP19.83■□□□□ 0.77
NIF3L1-205ENST00000409588 BTAF1O14981 1849 aa19.82■□□□□ 0.76
NIF3L1-205ENST00000409588 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
NIF3L1-205ENST00000409588 CYP27B1O15528 508 aa19.81■□□□□ 0.76
NIF3L1-205ENST00000409588 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
NIF3L1-205ENST00000409588 MTFR1LQ9H019 292 aa19.81■□□□□ 0.76
NIF3L1-205ENST00000409588 LRRC4BQ9NT99 713 aa19.81■□□□□ 0.76
NIF3L1-205ENST00000409588 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
NIF3L1-205ENST00000409588 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
NIF3L1-205ENST00000409588 SMARCC1Q92922 1105 aaPredicted RBP19.8■□□□□ 0.76
NIF3L1-205ENST00000409588 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
NIF3L1-205ENST00000409588 AKT1S1Q96B36 256 aa19.79■□□□□ 0.76
NIF3L1-205ENST00000409588 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
NIF3L1-205ENST00000409588 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
NIF3L1-205ENST00000409588 SHANK3Q9BYB0 1731 aa19.77■□□□□ 0.76
NIF3L1-205ENST00000409588 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
NIF3L1-205ENST00000409588 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
NIF3L1-205ENST00000409588 PLEKHO1Q53GL0 409 aaPredicted RBP19.76■□□□□ 0.75
NIF3L1-205ENST00000409588 MPRIPQ6WCQ1 1025 aa19.76■□□□□ 0.75
NIF3L1-205ENST00000409588 TFCP2L1Q9NZI6 479 aa19.76■□□□□ 0.75
NIF3L1-205ENST00000409588 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
NIF3L1-205ENST00000409588 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
NIF3L1-205ENST00000409588 NPC1L1Q9UHC9 1359 aa19.74■□□□□ 0.75
NIF3L1-205ENST00000409588 PHKG2P15735 406 aa19.74■□□□□ 0.75
NIF3L1-205ENST00000409588 PTGER2P43116 358 aa19.74■□□□□ 0.75
NIF3L1-205ENST00000409588 PDGFDQ9GZP0 370 aaPredicted RBP19.74■□□□□ 0.75
NIF3L1-205ENST00000409588 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 FLAD1Q8NFF5 587 aa19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
NIF3L1-205ENST00000409588 ERVV-2B6SEH9 535 aa19.72■□□□□ 0.75
NIF3L1-205ENST00000409588 LY75O60449 1722 aa19.71■□□□□ 0.75
NIF3L1-205ENST00000409588 PIGBQ92521 554 aa19.71■□□□□ 0.75
NIF3L1-205ENST00000409588 DCAF5Q96JK2 942 aa19.71■□□□□ 0.75
NIF3L1-205ENST00000409588 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
NIF3L1-205ENST00000409588 IL13P35225 146 aa19.7■□□□□ 0.74
NIF3L1-205ENST00000409588 MTHFSP49914 203 aa19.7■□□□□ 0.74
NIF3L1-205ENST00000409588 SGIP1Q9BQI5 828 aa19.7■□□□□ 0.74
NIF3L1-205ENST00000409588 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
NIF3L1-205ENST00000409588 POLD1P28340 1107 aa19.68■□□□□ 0.74
NIF3L1-205ENST00000409588 ARXQ96QS3 562 aa19.68■□□□□ 0.74
NIF3L1-205ENST00000409588 PNPLA7Q6ZV29 1317 aa19.68■□□□□ 0.74
NIF3L1-205ENST00000409588 KDRP35968 1356 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms