RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 PLSCR1O15162 318 aa19.38■□□□□ 0.69
COPS7B-205ENST00000409295 IL13P35225 146 aa19.38■□□□□ 0.69
COPS7B-205ENST00000409295 CAMKK2Q96RR4 588 aa19.38■□□□□ 0.69
COPS7B-205ENST00000409295 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
COPS7B-205ENST00000409295 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
COPS7B-205ENST00000409295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.38■□□□□ 0.698e-10■■■□□ 14.8
COPS7B-205ENST00000409295 MEGF6O75095 1541 aa19.37■□□□□ 0.69
COPS7B-205ENST00000409295 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
COPS7B-205ENST00000409295 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
COPS7B-205ENST00000409295 WNK3Q9BYP7 1800 aa19.37■□□□□ 0.69
COPS7B-205ENST00000409295 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
COPS7B-205ENST00000409295 KCNQ2O43526 872 aa19.36■□□□□ 0.69
COPS7B-205ENST00000409295 PLEKHO1Q53GL0 409 aaPredicted RBP19.36■□□□□ 0.69
COPS7B-205ENST00000409295 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
COPS7B-205ENST00000409295 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
COPS7B-205ENST00000409295 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
COPS7B-205ENST00000409295 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
COPS7B-205ENST00000409295 AMOTQ4VCS5 1084 aa19.34■□□□□ 0.69
COPS7B-205ENST00000409295 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
COPS7B-205ENST00000409295 PTF1AQ7RTS3 328 aa19.34■□□□□ 0.69
COPS7B-205ENST00000409295 PPP2R1AP30153 589 aa19.33■□□□□ 0.68
COPS7B-205ENST00000409295 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
COPS7B-205ENST00000409295 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
COPS7B-205ENST00000409295 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
COPS7B-205ENST00000409295 CYP27B1O15528 508 aa19.32■□□□□ 0.68
COPS7B-205ENST00000409295 U2SURPO15042 1029 aaKnown RBP19.31■□□□□ 0.68
COPS7B-205ENST00000409295 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
COPS7B-205ENST00000409295 PLEKHG2Q9H7P9 1386 aa19.3■□□□□ 0.68
COPS7B-205ENST00000409295 HSP90AB1P08238 724 aaKnown RBP19.29■□□□□ 0.68
COPS7B-205ENST00000409295 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
COPS7B-205ENST00000409295 RALBP1Q15311 655 aa19.29■□□□□ 0.68
COPS7B-205ENST00000409295 HMOX1P09601 288 aa19.28■□□□□ 0.68
COPS7B-205ENST00000409295 PHKG2P15735 406 aa19.28■□□□□ 0.68
COPS7B-205ENST00000409295 TXNRD1Q16881 649 aa19.28■□□□□ 0.68
COPS7B-205ENST00000409295 C1orf141Q5JVX7 400 aa19.28■□□□□ 0.68
COPS7B-205ENST00000409295 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
COPS7B-205ENST00000409295 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
COPS7B-205ENST00000409295 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.68
COPS7B-205ENST00000409295 TNS1Q9HBL0 1735 aaKnown RBP19.26■□□□□ 0.67
COPS7B-205ENST00000409295 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
COPS7B-205ENST00000409295 KDRP35968 1356 aa19.25■□□□□ 0.67
COPS7B-205ENST00000409295 HMGB2P26583 209 aaKnown RBP19.25■□□□□ 0.67
COPS7B-205ENST00000409295 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
COPS7B-205ENST00000409295 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
COPS7B-205ENST00000409295 PROM2Q8N271 834 aa19.24■□□□□ 0.67
COPS7B-205ENST00000409295 PSDA5PKW4 1024 aaPredicted RBP19.23■□□□□ 0.67
COPS7B-205ENST00000409295 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
COPS7B-205ENST00000409295 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
COPS7B-205ENST00000409295 DCAF5Q96JK2 942 aa19.23■□□□□ 0.67
COPS7B-205ENST00000409295 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
COPS7B-205ENST00000409295 SLC27A3Q5K4L6 730 aa19.22■□□□□ 0.67
COPS7B-205ENST00000409295 SMARCC1Q92922 1105 aaPredicted RBP19.22■□□□□ 0.67
COPS7B-205ENST00000409295 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
COPS7B-205ENST00000409295 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
COPS7B-205ENST00000409295 STK32BQ9NY57 414 aa19.21■□□□□ 0.67
COPS7B-205ENST00000409295 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
COPS7B-205ENST00000409295 PIGBQ92521 554 aa19.2■□□□□ 0.66
COPS7B-205ENST00000409295 NEFMP07197 916 aa19.19■□□□□ 0.66
COPS7B-205ENST00000409295 CABP4P57796 275 aa19.19■□□□□ 0.66
COPS7B-205ENST00000409295 FCHSD2O94868 740 aa19.18■□□□□ 0.66
COPS7B-205ENST00000409295 CCNL1Q9UK58 526 aaPredicted RBP19.18■□□□□ 0.66
COPS7B-205ENST00000409295 PKD1L3Q7Z443 1732 aa19.17■□□□□ 0.66
COPS7B-205ENST00000409295 MTHFSDQ2M296 383 aaKnown RBP19.17■□□□□ 0.66
COPS7B-205ENST00000409295 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
COPS7B-205ENST00000409295 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
COPS7B-205ENST00000409295 MYBBP1AQ9BQG0 1328 aaKnown RBP19.17■□□□□ 0.66
COPS7B-205ENST00000409295 SHANK3Q9BYB0 1731 aa19.17■□□□□ 0.66
COPS7B-205ENST00000409295 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
COPS7B-205ENST00000409295 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
COPS7B-205ENST00000409295 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
COPS7B-205ENST00000409295 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
COPS7B-205ENST00000409295 LRRC4BQ9NT99 713 aa19.14■□□□□ 0.65
COPS7B-205ENST00000409295 BTAF1O14981 1849 aa19.14■□□□□ 0.65
COPS7B-205ENST00000409295 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
COPS7B-205ENST00000409295 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
COPS7B-205ENST00000409295 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
COPS7B-205ENST00000409295 PALLDQ8WX93 1383 aa19.13■□□□□ 0.65
COPS7B-205ENST00000409295 DOT1LQ8TEK3 1739 aa19.13■□□□□ 0.65
COPS7B-205ENST00000409295 RGPD3A6NKT7 1758 aaPredicted RBP19.13■□□□□ 0.65
COPS7B-205ENST00000409295 RGPD4Q7Z3J3 1758 aa19.13■□□□□ 0.65
COPS7B-205ENST00000409295 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
COPS7B-205ENST00000409295 KCNQ4P56696 695 aa19.12■□□□□ 0.65
COPS7B-205ENST00000409295 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
COPS7B-205ENST00000409295 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
COPS7B-205ENST00000409295 LGR6Q9HBX8 967 aa19.11■□□□□ 0.65
COPS7B-205ENST00000409295 ATG3Q9NT62 314 aa19.11■□□□□ 0.65
COPS7B-205ENST00000409295 TFCP2L1Q9NZI6 479 aa19.11■□□□□ 0.65
COPS7B-205ENST00000409295 RREB1Q92766 1687 aa19.11■□□□□ 0.65
COPS7B-205ENST00000409295 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
COPS7B-205ENST00000409295 LOC102724428A0A0B4J2F2 783 aa19.09■□□□□ 0.65
COPS7B-205ENST00000409295 SIK1P57059 783 aa19.09■□□□□ 0.65
COPS7B-205ENST00000409295 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
COPS7B-205ENST00000409295 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
COPS7B-205ENST00000409295 SLC52A2Q9HAB3 445 aa19.09■□□□□ 0.65
COPS7B-205ENST00000409295 ATP6V1AP38606 617 aa19.08■□□□□ 0.64
COPS7B-205ENST00000409295 TEFQ10587 303 aa19.08■□□□□ 0.64
COPS7B-205ENST00000409295 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.64
COPS7B-205ENST00000409295 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
COPS7B-205ENST00000409295 ANP32CO43423 234 aa19.07■□□□□ 0.64
COPS7B-205ENST00000409295 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms