RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 NUCB2P80303 420 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 MCM10Q7L590 875 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
ITGA6-202ENST00000409080 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 RPRD2Q5VT52 1461 aaKnown RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 IPO7O95373 1038 aaKnown RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 AACSQ86V21 672 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 DDX49Q9Y6V7 483 aaKnown RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
ITGA6-202ENST00000409080 RFC4P35249 363 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 MCM2P49736 904 aa16.94■□□□□ 0.3
ITGA6-202ENST00000409080 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
ITGA6-202ENST00000409080 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
ITGA6-202ENST00000409080 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
ITGA6-202ENST00000409080 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
ITGA6-202ENST00000409080 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
ITGA6-202ENST00000409080 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
ITGA6-202ENST00000409080 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
ITGA6-202ENST00000409080 TRIM22Q8IYM9 498 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 DDB1Q16531 1140 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 C1orf115Q9H7X2 142 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 PDCP20941 246 aa16.92■□□□□ 0.3
ITGA6-202ENST00000409080 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
ITGA6-202ENST00000409080 MYD88Q99836 296 aa16.91■□□□□ 0.3
ITGA6-202ENST00000409080 ST5P78524 1137 aa16.91■□□□□ 0.3
ITGA6-202ENST00000409080 TXLNAP40222 546 aa16.91■□□□□ 0.3
ITGA6-202ENST00000409080 TDO2P48775 406 aa16.91■□□□□ 0.3
ITGA6-202ENST00000409080 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
ITGA6-202ENST00000409080 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
ITGA6-202ENST00000409080 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
ITGA6-202ENST00000409080 KRI1Q8N9T8 703 aaKnown RBP16.9■□□□□ 0.3
ITGA6-202ENST00000409080 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 TRPM2O94759 1503 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 ANKRD18BA2A2Z9 1011 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
ITGA6-202ENST00000409080 PPIP5K1Q6PFW1 1433 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
ITGA6-202ENST00000409080 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.3
ITGA6-202ENST00000409080 SLC5A1P13866 664 aa16.89■□□□□ 0.29
ITGA6-202ENST00000409080 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
ITGA6-202ENST00000409080 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
ITGA6-202ENST00000409080 DDX46Q7L014 1031 aaKnown RBP16.88■□□□□ 0.29
ITGA6-202ENST00000409080 CDCA7Q9BWT1 371 aaPredicted RBP16.88■□□□□ 0.29
ITGA6-202ENST00000409080 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 NEO1Q92859 1461 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 AIDAQ96BJ3 306 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
ITGA6-202ENST00000409080 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-202ENST00000409080 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
ITGA6-202ENST00000409080 PDE4CQ08493 712 aa16.87■□□□□ 0.29
ITGA6-202ENST00000409080 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
ITGA6-202ENST00000409080 ABCF2Q9UG63 623 aa16.87■□□□□ 0.29
ITGA6-202ENST00000409080 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
ITGA6-202ENST00000409080 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
ITGA6-202ENST00000409080 POLD1P28340 1107 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
ITGA6-202ENST00000409080 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
ITGA6-202ENST00000409080 FOSBP53539 338 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 DZIP1Q86YF9 867 aaKnown RBP16.86■□□□□ 0.29
ITGA6-202ENST00000409080 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 BCAR3O75815 825 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 CDKL5O76039 1030 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 IL2RBP14784 551 aa16.86■□□□□ 0.29
ITGA6-202ENST00000409080 KRT32Q14532 448 aa16.85■□□□□ 0.29
ITGA6-202ENST00000409080 KCNA6P17658 529 aa16.85■□□□□ 0.29
ITGA6-202ENST00000409080 USP5P45974 858 aa16.84■□□□□ 0.29
ITGA6-202ENST00000409080 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
ITGA6-202ENST00000409080 RABEP1Q15276 862 aa16.84■□□□□ 0.29
ITGA6-202ENST00000409080 EPS15P42566 896 aa16.84■□□□□ 0.29
ITGA6-202ENST00000409080 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
ITGA6-202ENST00000409080 C6orf229H3BNL8 230 aa16.83■□□□□ 0.29
ITGA6-202ENST00000409080 MAP3K12Q12852 859 aa16.83■□□□□ 0.29
ITGA6-202ENST00000409080 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.29
ITGA6-202ENST00000409080 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.29
ITGA6-202ENST00000409080 PTPRCP08575 1304 aa16.83■□□□□ 0.29
ITGA6-202ENST00000409080 SLFN5Q08AF3 891 aa16.83■□□□□ 0.29
ITGA6-202ENST00000409080 JMYQ8N9B5 988 aa16.83■□□□□ 0.29
ITGA6-202ENST00000409080 OLFM4Q6UX06 510 aa16.83■□□□□ 0.28
ITGA6-202ENST00000409080 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.28
ITGA6-202ENST00000409080 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
ITGA6-202ENST00000409080 LDHCP07864 332 aa16.83■□□□□ 0.28
ITGA6-202ENST00000409080 CFAP74Q9C0B2 1584 aa16.83■□□□□ 0.28
ITGA6-202ENST00000409080 POLR3DP05423 398 aaPredicted RBP16.83■□□□□ 0.28
ITGA6-202ENST00000409080 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
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