RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CHL1O00533 1208 aa20.69■□□□□ 0.9
COL23A1-202ENST00000407622 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
COL23A1-202ENST00000407622 NCOA3Q9Y6Q9 1424 aa20.68■□□□□ 0.9
COL23A1-202ENST00000407622 CD2BP2O95400 341 aaKnown RBP20.67■□□□□ 0.9
COL23A1-202ENST00000407622 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
COL23A1-202ENST00000407622 INTS3Q68E01 1043 aaKnown RBP20.66■□□□□ 0.9
COL23A1-202ENST00000407622 MIS18AQ9NYP9 233 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 FOXO3O43524 673 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 KCNA6P17658 529 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 DDIT3P35638 169 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 SNX21Q969T3 373 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 ATP10DQ9P241 1426 aa20.66■□□□□ 0.9
COL23A1-202ENST00000407622 XRN1Q8IZH2 1706 aaKnown RBP20.65■□□□□ 0.9
COL23A1-202ENST00000407622 PLEKHM2Q8IWE5 1019 aa20.65■□□□□ 0.9
COL23A1-202ENST00000407622 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
COL23A1-202ENST00000407622 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
COL23A1-202ENST00000407622 MSH6P52701 1360 aa20.65■□□□□ 0.9
COL23A1-202ENST00000407622 KIF24Q5T7B8 1368 aa20.65■□□□□ 0.9
COL23A1-202ENST00000407622 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
COL23A1-202ENST00000407622 DCTPP1Q9H773 170 aa20.64■□□□□ 0.89
COL23A1-202ENST00000407622 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
COL23A1-202ENST00000407622 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.89
COL23A1-202ENST00000407622 CRB1P82279 1406 aa20.64■□□□□ 0.89
COL23A1-202ENST00000407622 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
COL23A1-202ENST00000407622 KDM4FA0A1W2PPD8 638 aa20.63■□□□□ 0.89
COL23A1-202ENST00000407622 OTUD7AQ8TE49 926 aaPredicted RBP20.62■□□□□ 0.89
COL23A1-202ENST00000407622 GZF1Q9H116 711 aaPredicted RBP20.62■□□□□ 0.89
COL23A1-202ENST00000407622 ARXQ96QS3 562 aa20.62■□□□□ 0.89
COL23A1-202ENST00000407622 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
COL23A1-202ENST00000407622 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
COL23A1-202ENST00000407622 CEP85Q6P2H3 762 aa20.61■□□□□ 0.89
COL23A1-202ENST00000407622 MEIS3Q99687 375 aa20.61■□□□□ 0.89
COL23A1-202ENST00000407622 RGPD8O14715 1765 aaPredicted RBP20.61■□□□□ 0.89
COL23A1-202ENST00000407622 CDC45O75419 566 aa20.6■□□□□ 0.89
COL23A1-202ENST00000407622 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
COL23A1-202ENST00000407622 FMN2Q9NZ56 1722 aa20.6■□□□□ 0.89
COL23A1-202ENST00000407622 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
COL23A1-202ENST00000407622 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
COL23A1-202ENST00000407622 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
COL23A1-202ENST00000407622 APBB1O00213 710 aa20.59■□□□□ 0.89
COL23A1-202ENST00000407622 SMARCA5O60264 1052 aaPredicted RBP20.59■□□□□ 0.89
COL23A1-202ENST00000407622 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
COL23A1-202ENST00000407622 TRAK2O60296 914 aa20.58■□□□□ 0.89
COL23A1-202ENST00000407622 TTC22Q5TAA0 569 aa20.58■□□□□ 0.89
COL23A1-202ENST00000407622 G2E3Q7L622 706 aa20.58■□□□□ 0.89
COL23A1-202ENST00000407622 ARHGEF10O15013 1369 aa20.58■□□□□ 0.88
COL23A1-202ENST00000407622 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
COL23A1-202ENST00000407622 TNPO1Q92973 898 aaKnown RBP20.56■□□□□ 0.88
COL23A1-202ENST00000407622 PTPRCP08575 1304 aa20.56■□□□□ 0.88
COL23A1-202ENST00000407622 F6X3S4 739 aa20.56■□□□□ 0.88
COL23A1-202ENST00000407622 RPAP2Q8IXW5 612 aaPredicted RBP20.55■□□□□ 0.88
COL23A1-202ENST00000407622 EYA1Q99502 592 aa20.55■□□□□ 0.88
COL23A1-202ENST00000407622 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
COL23A1-202ENST00000407622 HAP1P54257 671 aaPredicted RBP20.55■□□□□ 0.88
COL23A1-202ENST00000407622 SBNO1A3KN83 1393 aa20.54■□□□□ 0.88
COL23A1-202ENST00000407622 FLT4P35916 1363 aa20.54■□□□□ 0.88
COL23A1-202ENST00000407622 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
COL23A1-202ENST00000407622 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
COL23A1-202ENST00000407622 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
COL23A1-202ENST00000407622 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
COL23A1-202ENST00000407622 K7ELQ4 463 aaPredicted RBP20.54■□□□□ 0.88
COL23A1-202ENST00000407622 KDRP35968 1356 aa20.53■□□□□ 0.88
COL23A1-202ENST00000407622 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
COL23A1-202ENST00000407622 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL23A1-202ENST00000407622 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
COL23A1-202ENST00000407622 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
COL23A1-202ENST00000407622 AMPHP49418 695 aa20.52■□□□□ 0.88
COL23A1-202ENST00000407622 RAB3GAP1Q15042 981 aa20.52■□□□□ 0.88
COL23A1-202ENST00000407622 RTF1Q92541 710 aaKnown RBP20.52■□□□□ 0.88
COL23A1-202ENST00000407622 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.87
COL23A1-202ENST00000407622 GOLGA6L3A6NEY3 463 aa20.51■□□□□ 0.87
COL23A1-202ENST00000407622 DDX11L8A8MPP1 907 aa20.51■□□□□ 0.87
COL23A1-202ENST00000407622 SDSP20132 328 aa20.51■□□□□ 0.87
COL23A1-202ENST00000407622 HSPA2P54652 639 aa20.51■□□□□ 0.87
COL23A1-202ENST00000407622 NUTM2GQ5VZR2 741 aa20.51■□□□□ 0.87
COL23A1-202ENST00000407622 CIZ1Q9ULV3 898 aaPredicted RBP20.51■□□□□ 0.87
COL23A1-202ENST00000407622 HSP90AA1P07900 732 aaKnown RBP20.5■□□□□ 0.87
COL23A1-202ENST00000407622 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
COL23A1-202ENST00000407622 PANK2Q9BZ23 570 aa20.5■□□□□ 0.87
COL23A1-202ENST00000407622 USP26Q9BXU7 913 aa20.49■□□□□ 0.87
COL23A1-202ENST00000407622 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
COL23A1-202ENST00000407622 AK9Q5TCS8 1911 aa20.48■□□□□ 0.87
COL23A1-202ENST00000407622 NLRP6P59044 892 aa20.47■□□□□ 0.87
COL23A1-202ENST00000407622 NECTIN2Q92692 538 aa20.47■□□□□ 0.87
COL23A1-202ENST00000407622 SSFA2P28290 1259 aa20.47■□□□□ 0.87
COL23A1-202ENST00000407622 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
COL23A1-202ENST00000407622 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
COL23A1-202ENST00000407622 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
COL23A1-202ENST00000407622 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
COL23A1-202ENST00000407622 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
COL23A1-202ENST00000407622 LMTK3Q96Q04 1460 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 HOXC9P31274 260 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 CCT4P50991 539 aaKnown RBP20.44■□□□□ 0.86
COL23A1-202ENST00000407622 RABEP1Q15276 862 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 TSHZ3Q63HK5 1081 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
COL23A1-202ENST00000407622 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
COL23A1-202ENST00000407622 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
COL23A1-202ENST00000407622 GBP4Q96PP9 640 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms