RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
NR1H3-204ENST00000407404 SHANK3Q9BYB0 1731 aa22.56■■□□□ 1.2
NR1H3-204ENST00000407404 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
NR1H3-204ENST00000407404 DIAPH1O60610 1272 aaKnown RBP22.56■■□□□ 1.2
NR1H3-204ENST00000407404 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
NR1H3-204ENST00000407404 APBA3O96018 575 aa22.54■■□□□ 1.2
NR1H3-204ENST00000407404 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
NR1H3-204ENST00000407404 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
NR1H3-204ENST00000407404 PCDH11XQ9BZA7 1347 aa22.53■■□□□ 1.2
NR1H3-204ENST00000407404 PCDH11YQ9BZA8 1340 aa22.53■■□□□ 1.2
NR1H3-204ENST00000407404 EP400Q96L91 3159 aa22.53■■□□□ 1.2
NR1H3-204ENST00000407404 SPG7Q9UQ90 795 aa22.53■■□□□ 1.2
NR1H3-204ENST00000407404 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
NR1H3-204ENST00000407404 EN1Q05925 392 aaPredicted RBP22.52■■□□□ 1.2
NR1H3-204ENST00000407404 SULT6B1Q6IMI4 303 aa22.52■■□□□ 1.2
NR1H3-204ENST00000407404 ACSBG1Q96GR2 724 aa22.52■■□□□ 1.2
NR1H3-204ENST00000407404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.52■■□□□ 1.2
NR1H3-204ENST00000407404 COL3A1P02461 1466 aaPredicted RBP22.52■■□□□ 1.2
NR1H3-204ENST00000407404 PLEKHG2Q9H7P9 1386 aa22.51■■□□□ 1.19
NR1H3-204ENST00000407404 AEBP1Q8IUX7 1158 aa22.51■■□□□ 1.19
NR1H3-204ENST00000407404 RALBP1Q15311 655 aa22.5■■□□□ 1.19
NR1H3-204ENST00000407404 NHSQ6T4R5 1651 aa22.49■■□□□ 1.19
NR1H3-204ENST00000407404 PTF1AQ7RTS3 328 aa22.49■■□□□ 1.19
NR1H3-204ENST00000407404 KDRP35968 1356 aa22.49■■□□□ 1.19
NR1H3-204ENST00000407404 CYP27B1O15528 508 aa22.48■■□□□ 1.19
NR1H3-204ENST00000407404 KCNQ2O43526 872 aa22.48■■□□□ 1.19
NR1H3-204ENST00000407404 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
NR1H3-204ENST00000407404 CAMKK2Q96RR4 588 aa22.47■■□□□ 1.19
NR1H3-204ENST00000407404 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
NR1H3-204ENST00000407404 HMOX1P09601 288 aa22.46■■□□□ 1.19
NR1H3-204ENST00000407404 EZH2Q15910 746 aaKnown RBP22.46■■□□□ 1.19
NR1H3-204ENST00000407404 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.19
NR1H3-204ENST00000407404 AMOTQ4VCS5 1084 aa22.45■■□□□ 1.18
NR1H3-204ENST00000407404 PLSCR1O15162 318 aa22.44■■□□□ 1.18
NR1H3-204ENST00000407404 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
NR1H3-204ENST00000407404 SYTL4Q96C24 671 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-204ENST00000407404 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
NR1H3-204ENST00000407404 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
NR1H3-204ENST00000407404 KAT6BQ8WYB5 2073 aa22.43■■□□□ 1.18
NR1H3-204ENST00000407404 PHKG2P15735 406 aa22.42■■□□□ 1.18
NR1H3-204ENST00000407404 NKX1-1Q15270 411 aaPredicted RBP22.42■■□□□ 1.18
NR1H3-204ENST00000407404 RGPD3A6NKT7 1758 aaPredicted RBP22.42■■□□□ 1.18
NR1H3-204ENST00000407404 RGPD4Q7Z3J3 1758 aa22.42■■□□□ 1.18
NR1H3-204ENST00000407404 BTAF1O14981 1849 aa22.41■■□□□ 1.18
NR1H3-204ENST00000407404 ZNF530Q6P9A1 599 aaPredicted RBP22.4■■□□□ 1.18
NR1H3-204ENST00000407404 RREB1Q92766 1687 aa22.39■■□□□ 1.18
NR1H3-204ENST00000407404 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.17
NR1H3-204ENST00000407404 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
NR1H3-204ENST00000407404 HSP90AB1P08238 724 aaKnown RBP22.37■■□□□ 1.17
NR1H3-204ENST00000407404 C1orf141Q5JVX7 400 aa22.37■■□□□ 1.17
NR1H3-204ENST00000407404 PRKRIP1Q9H875 184 aaPredicted RBP22.37■■□□□ 1.17
NR1H3-204ENST00000407404 U2AF1L5P0DN76 240 aaPredicted RBP22.36■■□□□ 1.17
NR1H3-204ENST00000407404 U2AF1Q01081 240 aaKnown RBP eCLIP22.36■■□□□ 1.17
NR1H3-204ENST00000407404 NUP188Q5SRE5 1749 aa22.35■■□□□ 1.17
NR1H3-204ENST00000407404 TXNRD1Q16881 649 aa22.34■■□□□ 1.17
NR1H3-204ENST00000407404 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
NR1H3-204ENST00000407404 PROM2Q8N271 834 aa22.34■■□□□ 1.17
NR1H3-204ENST00000407404 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
NR1H3-204ENST00000407404 ITGB4P16144 1822 aa22.34■■□□□ 1.17
NR1H3-204ENST00000407404 RSPH6AQ9H0K4 717 aa22.33■■□□□ 1.17
NR1H3-204ENST00000407404 FCHSD2O94868 740 aa22.32■■□□□ 1.16
NR1H3-204ENST00000407404 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
NR1H3-204ENST00000407404 MTHFSDQ2M296 383 aaKnown RBP22.32■■□□□ 1.16
NR1H3-204ENST00000407404 AKAP4Q5JQC9 854 aa22.32■■□□□ 1.16
NR1H3-204ENST00000407404 NBPF14Q5TI25 921 aa22.31■■□□□ 1.16
NR1H3-204ENST00000407404 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
NR1H3-204ENST00000407404 ERVV-2B6SEH9 535 aa22.31■■□□□ 1.16
NR1H3-204ENST00000407404 KDM6AO15550 1401 aaPredicted RBP22.3■■□□□ 1.16
NR1H3-204ENST00000407404 PIGBQ92521 554 aa22.3■■□□□ 1.16
NR1H3-204ENST00000407404 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
NR1H3-204ENST00000407404 PHACTR3Q96KR7 559 aa22.28■■□□□ 1.16
NR1H3-204ENST00000407404 LY75O60449 1722 aa22.28■■□□□ 1.16
NR1H3-204ENST00000407404 CABP4P57796 275 aa22.27■■□□□ 1.16
NR1H3-204ENST00000407404 SLC27A3Q5K4L6 730 aa22.27■■□□□ 1.16
NR1H3-204ENST00000407404 SMARCC1Q92922 1105 aaPredicted RBP22.27■■□□□ 1.16
NR1H3-204ENST00000407404 SCN11AQ9UI33 1791 aa22.26■■□□□ 1.15
NR1H3-204ENST00000407404 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
NR1H3-204ENST00000407404 PSDA5PKW4 1024 aaPredicted RBP22.25■■□□□ 1.15
NR1H3-204ENST00000407404 ANP32CO43423 234 aa22.25■■□□□ 1.15
NR1H3-204ENST00000407404 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
NR1H3-204ENST00000407404 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
NR1H3-204ENST00000407404 RNMTO43148 476 aaKnown RBP22.24■■□□□ 1.15
NR1H3-204ENST00000407404 NEFMP07197 916 aa22.24■■□□□ 1.15
NR1H3-204ENST00000407404 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
NR1H3-204ENST00000407404 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
NR1H3-204ENST00000407404 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
NR1H3-204ENST00000407404 CCNL1Q9UK58 526 aaPredicted RBP22.23■■□□□ 1.15
NR1H3-204ENST00000407404 MAP3K5Q99683 1374 aa22.23■■□□□ 1.15
NR1H3-204ENST00000407404 NFATC2IPQ8NCF5 419 aa22.22■■□□□ 1.15
NR1H3-204ENST00000407404 ANO8Q9HCE9 1232 aaPredicted RBP22.22■■□□□ 1.15
NR1H3-204ENST00000407404 STK32BQ9NY57 414 aa22.22■■□□□ 1.15
NR1H3-204ENST00000407404 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
NR1H3-204ENST00000407404 VIRMAQ69YN4 1812 aaKnown RBP22.22■■□□□ 1.15
NR1H3-204ENST00000407404 KCNQ4P56696 695 aa22.21■■□□□ 1.15
NR1H3-204ENST00000407404 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
NR1H3-204ENST00000407404 ADAMTS7Q9UKP4 1686 aa22.21■■□□□ 1.15
NR1H3-204ENST00000407404 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
NR1H3-204ENST00000407404 PLEKHF1Q96S99 279 aa22.2■■□□□ 1.14
NR1H3-204ENST00000407404 SLC52A2Q9HAB3 445 aa22.2■■□□□ 1.14
NR1H3-204ENST00000407404 PAPPAQ13219 1627 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms