RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
PTPN12-202ENST00000407343 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
PTPN12-202ENST00000407343 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
PTPN12-202ENST00000407343 NOD1Q9Y239 953 aa11.92□□□□□ -0.5
PTPN12-202ENST00000407343 SMPD1P17405 629 aa11.91□□□□□ -0.5
PTPN12-202ENST00000407343 STK32AQ8WU08 396 aa11.91□□□□□ -0.5
PTPN12-202ENST00000407343 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
PTPN12-202ENST00000407343 CARNS1A5YM72 827 aa11.9□□□□□ -0.5
PTPN12-202ENST00000407343 RGS20O76081 388 aa11.9□□□□□ -0.5
PTPN12-202ENST00000407343 RASA1P20936 1047 aa11.9□□□□□ -0.5
PTPN12-202ENST00000407343 GTF2IP78347 998 aa11.9□□□□□ -0.5
PTPN12-202ENST00000407343 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
PTPN12-202ENST00000407343 NNTQ13423 1086 aa11.9□□□□□ -0.5
PTPN12-202ENST00000407343 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
PTPN12-202ENST00000407343 USP4Q13107 963 aa11.89□□□□□ -0.51
PTPN12-202ENST00000407343 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
PTPN12-202ENST00000407343 SIX5Q8N196 739 aa11.89□□□□□ -0.51
PTPN12-202ENST00000407343 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
PTPN12-202ENST00000407343 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
PTPN12-202ENST00000407343 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
PTPN12-202ENST00000407343 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
PTPN12-202ENST00000407343 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
PTPN12-202ENST00000407343 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
PTPN12-202ENST00000407343 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
PTPN12-202ENST00000407343 TMEM164Q5U3C3 297 aa11.87□□□□□ -0.51
PTPN12-202ENST00000407343 LARGE2Q8N3Y3 721 aa11.87□□□□□ -0.51
PTPN12-202ENST00000407343 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
PTPN12-202ENST00000407343 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
PTPN12-202ENST00000407343 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
PTPN12-202ENST00000407343 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
PTPN12-202ENST00000407343 ZNF594Q96JF6 807 aaPredicted RBP11.86□□□□□ -0.51
PTPN12-202ENST00000407343 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
PTPN12-202ENST00000407343 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
PTPN12-202ENST00000407343 DPYDQ12882 1025 aa11.85□□□□□ -0.51
PTPN12-202ENST00000407343 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
PTPN12-202ENST00000407343 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
PTPN12-202ENST00000407343 EMILIN1Q9Y6C2 1016 aa11.85□□□□□ -0.51
PTPN12-202ENST00000407343 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
PTPN12-202ENST00000407343 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
PTPN12-202ENST00000407343 STAU1O95793 577 aaKnown RBP11.84□□□□□ -0.51
PTPN12-202ENST00000407343 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
PTPN12-202ENST00000407343 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
PTPN12-202ENST00000407343 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
PTPN12-202ENST00000407343 TIMP2P16035 220 aa11.83□□□□□ -0.52
PTPN12-202ENST00000407343 SCNN1DP51172 638 aa11.83□□□□□ -0.52
PTPN12-202ENST00000407343 MYT1Q01538 1121 aa11.83□□□□□ -0.52
PTPN12-202ENST00000407343 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
PTPN12-202ENST00000407343 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
PTPN12-202ENST00000407343 HPS1Q92902 700 aa11.82□□□□□ -0.52
PTPN12-202ENST00000407343 ZFAND3Q9H8U3 227 aa11.82□□□□□ -0.52
PTPN12-202ENST00000407343 PGPEP1Q9NXJ5 209 aa11.82□□□□□ -0.52
PTPN12-202ENST00000407343 CBLBQ13191 982 aa11.81□□□□□ -0.52
PTPN12-202ENST00000407343 Q6ZVU0 165 aa11.81□□□□□ -0.52
PTPN12-202ENST00000407343 TPCN2Q8NHX9 752 aa11.81□□□□□ -0.52
PTPN12-202ENST00000407343 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
PTPN12-202ENST00000407343 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
PTPN12-202ENST00000407343 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
PTPN12-202ENST00000407343 ZIC2O95409 532 aaPredicted RBP11.79□□□□□ -0.52
PTPN12-202ENST00000407343 WDR4P57081 412 aaKnown RBP11.79□□□□□ -0.52
PTPN12-202ENST00000407343 FAM200AQ8TCP9 573 aa11.79□□□□□ -0.52
PTPN12-202ENST00000407343 ETNK1Q9HBU6 452 aa11.78□□□□□ -0.52
PTPN12-202ENST00000407343 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
PTPN12-202ENST00000407343 ADH1AP07327 375 aa11.77□□□□□ -0.53
PTPN12-202ENST00000407343 SEC13P55735 322 aa11.77□□□□□ -0.53
PTPN12-202ENST00000407343 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTPN12-202ENST00000407343 ZNF358Q9NW07 568 aa11.77□□□□□ -0.53
PTPN12-202ENST00000407343 CYP2U1Q7Z449 544 aa11.76□□□□□ -0.53
PTPN12-202ENST00000407343 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
PTPN12-202ENST00000407343 M0R2N6 131 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 GNRH1P01148 92 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 GDF10P55107 478 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 PSME1Q06323 249 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 HRH3Q9Y5N1 445 aa11.75□□□□□ -0.53
PTPN12-202ENST00000407343 INHAP05111 366 aa11.74□□□□□ -0.53
PTPN12-202ENST00000407343 EPHA4P54764 986 aa11.74□□□□□ -0.53
PTPN12-202ENST00000407343 SWI5Q1ZZU3 235 aa11.74□□□□□ -0.53
PTPN12-202ENST00000407343 MEIOBQ8N635 442 aa11.74□□□□□ -0.53
PTPN12-202ENST00000407343 AVPP01185 164 aa11.73□□□□□ -0.53
PTPN12-202ENST00000407343 IL2RAP01589 272 aa11.73□□□□□ -0.53
PTPN12-202ENST00000407343 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
PTPN12-202ENST00000407343 RAB6BQ9NRW1 208 aa11.73□□□□□ -0.53
PTPN12-202ENST00000407343 PDE4CQ08493 712 aa11.72□□□□□ -0.53
PTPN12-202ENST00000407343 OCLNQ16625 522 aa11.72□□□□□ -0.53
PTPN12-202ENST00000407343 TSEN2Q8NCE0 465 aaKnown RBP11.72□□□□□ -0.53
PTPN12-202ENST00000407343 TRIM52Q96A61 297 aa11.72□□□□□ -0.53
PTPN12-202ENST00000407343 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
PTPN12-202ENST00000407343 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
PTPN12-202ENST00000407343 PTGIRP43119 386 aa11.71□□□□□ -0.53
PTPN12-202ENST00000407343 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
PTPN12-202ENST00000407343 A0A1W2PRU2 124 aa11.69□□□□□ -0.54
PTPN12-202ENST00000407343 LGR5O75473 907 aa11.69□□□□□ -0.54
PTPN12-202ENST00000407343 SSFA2P28290 1259 aa11.69□□□□□ -0.54
PTPN12-202ENST00000407343 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
PTPN12-202ENST00000407343 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
PTPN12-202ENST00000407343 BRD1O95696 1058 aa11.68□□□□□ -0.54
PTPN12-202ENST00000407343 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
PTPN12-202ENST00000407343 CLN3Q13286 438 aa11.68□□□□□ -0.54
PTPN12-202ENST00000407343 MTFR1Q15390 333 aa11.68□□□□□ -0.54
PTPN12-202ENST00000407343 WEE1P30291 646 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms