RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 TUBGCP6Q96RT7 1819 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 GPR162Q16538 588 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 SP7Q8TDD2 431 aaPredicted RBP8.9□□□□□ -0.98
RPA3-204ENST00000406109 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
RPA3-204ENST00000406109 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
RPA3-204ENST00000406109 USP31Q70CQ4 1352 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 USP54Q70EL1 1684 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 GIGYF1O75420 1035 aaPredicted RBP8.88□□□□□ -0.99
RPA3-204ENST00000406109 IL2RBP14784 551 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 YBX3P16989 372 aaKnown RBP eCLIP8.88□□□□□ -0.992e-8■■□□□ 13.2
RPA3-204ENST00000406109 KCNQ4P56696 695 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 SLC16A10Q8TF71 515 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
RPA3-204ENST00000406109 KTN1Q86UP2 1357 aaKnown RBP8.87□□□□□ -0.99
RPA3-204ENST00000406109 LTN1O94822 1766 aa8.87□□□□□ -0.99
RPA3-204ENST00000406109 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
RPA3-204ENST00000406109 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
RPA3-204ENST00000406109 MON2Q7Z3U7 1717 aa8.87□□□□□ -0.99
RPA3-204ENST00000406109 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
RPA3-204ENST00000406109 SBNO2Q9Y2G9 1366 aa8.86□□□□□ -0.99
RPA3-204ENST00000406109 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
RPA3-204ENST00000406109 NME9Q86XW9 330 aa8.86□□□□□ -0.99
RPA3-204ENST00000406109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.86□□□□□ -0.99
RPA3-204ENST00000406109 ANKRD24Q8TF21 1146 aa8.86□□□□□ -0.99
RPA3-204ENST00000406109 NSD2O96028 1365 aa8.86□□□□□ -0.99
RPA3-204ENST00000406109 POLD1P28340 1107 aa8.85□□□□□ -0.99
RPA3-204ENST00000406109 SIN3AQ96ST3 1273 aa8.85□□□□□ -0.99
RPA3-204ENST00000406109 TFCP2L1Q9NZI6 479 aa8.85□□□□□ -0.99
RPA3-204ENST00000406109 LY75O60449 1722 aa8.85□□□□□ -0.99
RPA3-204ENST00000406109 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
RPA3-204ENST00000406109 FXR2P51116 673 aaKnown RBP eCLIP8.84□□□□□ -0.99
RPA3-204ENST00000406109 PELP1Q8IZL8 1130 aaKnown RBP8.84□□□□□ -0.99
RPA3-204ENST00000406109 KLHL34Q8N239 644 aa8.84□□□□□ -0.99
RPA3-204ENST00000406109 COL23A1Q86Y22 540 aaPredicted RBP8.83□□□□□ -1
RPA3-204ENST00000406109 DDX54Q8TDD1 881 aaKnown RBP8.83□□□□□ -1
RPA3-204ENST00000406109 ATP10DQ9P241 1426 aa8.82□□□□□ -1
RPA3-204ENST00000406109 GRIN3BO60391 1043 aa8.82□□□□□ -1
RPA3-204ENST00000406109 IP6K1Q92551 441 aa8.82□□□□□ -1
RPA3-204ENST00000406109 SLC12A5Q9H2X9 1139 aa8.82□□□□□ -1
RPA3-204ENST00000406109 ADCY9O60503 1353 aa8.82□□□□□ -1
RPA3-204ENST00000406109 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
RPA3-204ENST00000406109 FAM208AQ9UK61 1670 aaKnown RBP8.81□□□□□ -1
RPA3-204ENST00000406109 RGPD2P0DJD1 1756 aa8.81□□□□□ -1
RPA3-204ENST00000406109 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
RPA3-204ENST00000406109 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
RPA3-204ENST00000406109 HAX1O00165 279 aa8.81□□□□□ -1
RPA3-204ENST00000406109 SPDYE6P0CI01 402 aa8.81□□□□□ -1
RPA3-204ENST00000406109 SPDYE2Q495Y8 402 aa8.81□□□□□ -1
RPA3-204ENST00000406109 ROCK2O75116 1388 aaKnown RBP8.81□□□□□ -1
RPA3-204ENST00000406109 FBLN1P23142 703 aa8.8□□□□□ -1
RPA3-204ENST00000406109 MSL1Q68DK7 614 aa8.8□□□□□ -1
RPA3-204ENST00000406109 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
RPA3-204ENST00000406109 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
RPA3-204ENST00000406109 CCNL1Q9UK58 526 aaPredicted RBP8.8□□□□□ -1
RPA3-204ENST00000406109 MEGF6O75095 1541 aa8.8□□□□□ -1
RPA3-204ENST00000406109 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
RPA3-204ENST00000406109 A0A1W2PP64 1363 aa8.79□□□□□ -1
RPA3-204ENST00000406109 HSPA6P17066 643 aa8.79□□□□□ -1
RPA3-204ENST00000406109 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
RPA3-204ENST00000406109 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
RPA3-204ENST00000406109 CD2APQ9Y5K6 639 aa8.79□□□□□ -1
RPA3-204ENST00000406109 TAF1LQ8IZX4 1826 aa8.78□□□□□ -1
RPA3-204ENST00000406109 HOXC9P31274 260 aa8.78□□□□□ -1
RPA3-204ENST00000406109 TMC1Q8TDI8 760 aa8.78□□□□□ -1
RPA3-204ENST00000406109 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
RPA3-204ENST00000406109 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
RPA3-204ENST00000406109 NBPF6Q5VWK0 638 aa8.77□□□□□ -1.01
RPA3-204ENST00000406109 CCER1Q8TC90 406 aaPredicted RBP8.77□□□□□ -1.01
RPA3-204ENST00000406109 NBPF4Q96M43 638 aa8.77□□□□□ -1.01
RPA3-204ENST00000406109 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
RPA3-204ENST00000406109 C5P01031 1676 aa8.77□□□□□ -1.01
RPA3-204ENST00000406109 KIF3CO14782 793 aa8.76□□□□□ -1.01
RPA3-204ENST00000406109 SMIM5Q71RC9 77 aa8.76□□□□□ -1.01
RPA3-204ENST00000406109 HDGFL2Q7Z4V5 671 aaPredicted RBP8.76□□□□□ -1.01
RPA3-204ENST00000406109 ZNF526Q8TF50 670 aaPredicted RBP8.76□□□□□ -1.01
RPA3-204ENST00000406109 TOGARAM1Q9Y4F4 1720 aa8.76□□□□□ -1.01
RPA3-204ENST00000406109 USP47Q96K76 1375 aa8.75□□□□□ -1.01
RPA3-204ENST00000406109 UBR3Q6ZT12 1888 aa8.75□□□□□ -1.01
RPA3-204ENST00000406109 DNAJC5GQ8N7S2 189 aa8.75□□□□□ -1.01
RPA3-204ENST00000406109 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
RPA3-204ENST00000406109 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
RPA3-204ENST00000406109 USHBP1Q8N6Y0 703 aa8.74□□□□□ -1.01
RPA3-204ENST00000406109 WWC3Q9ULE0 1092 aa8.74□□□□□ -1.01
RPA3-204ENST00000406109 CGNL1Q0VF96 1302 aa8.74□□□□□ -1.01
RPA3-204ENST00000406109 IGSF1Q8N6C5 1336 aa8.74□□□□□ -1.01
RPA3-204ENST00000406109 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
RPA3-204ENST00000406109 ITGB4P16144 1822 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 CYP27B1O15528 508 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 AMPHP49418 695 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
RPA3-204ENST00000406109 FLAD1Q8NFF5 587 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 COG3Q96JB2 828 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 TESK2Q96S53 571 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
RPA3-204ENST00000406109 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
RPA3-204ENST00000406109 RTL1A6NKG5 1358 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms