RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ARHGAP31Q2M1Z3 1444 aa19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 ZNF445P59923 1031 aa19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 ATP2B3Q16720 1220 aa19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 CFAP65Q6ZU64 1925 aaKnown RBP19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 ZNF771Q7L3S4 317 aaPredicted RBP19.75■□□□□ 0.75
COL4A3BP-204ENST00000405807 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
COL4A3BP-204ENST00000405807 HDGFL2Q7Z4V5 671 aaPredicted RBP19.74■□□□□ 0.75
COL4A3BP-204ENST00000405807 HS1BP3Q53T59 392 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 GEMIN8Q9NWZ8 242 aaKnown RBP19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 STK26Q9P289 416 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 ABCC4O15439 1325 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 PRR29P0C7W0 189 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 GNAI1P63096 354 aa19.73■□□□□ 0.75
COL4A3BP-204ENST00000405807 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.72■□□□□ 0.75
COL4A3BP-204ENST00000405807 MCTP1Q6DN14 999 aa19.72■□□□□ 0.75
COL4A3BP-204ENST00000405807 NFE2L2Q16236 605 aa19.72■□□□□ 0.75
COL4A3BP-204ENST00000405807 FAM43BQ6ZT52 329 aaPredicted RBP19.72■□□□□ 0.75
COL4A3BP-204ENST00000405807 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 TRIM6-TRIM34B2RNG4 842 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 TRIM34Q9BYJ4 488 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 CWC22Q9HCG8 908 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
COL4A3BP-204ENST00000405807 GSPT1P15170 499 aaKnown RBP19.71■□□□□ 0.74
COL4A3BP-204ENST00000405807 PLEKHM2Q8IWE5 1019 aa19.71■□□□□ 0.74
COL4A3BP-204ENST00000405807 API5Q9BZZ5 524 aaKnown RBP19.71■□□□□ 0.74
COL4A3BP-204ENST00000405807 YY1AP1Q9H869 796 aa19.71■□□□□ 0.74
COL4A3BP-204ENST00000405807 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
COL4A3BP-204ENST00000405807 SASS6Q6UVJ0 657 aa19.7■□□□□ 0.74
COL4A3BP-204ENST00000405807 TSPYL6Q8N831 410 aa19.7■□□□□ 0.74
COL4A3BP-204ENST00000405807 CYP2E1P05181 493 aaPredicted RBP19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 ZSCAN23Q3MJ62 389 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 CAVIN1Q6NZI2 390 aaKnown RBP19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 USP26Q9BXU7 913 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 LMBRD1Q9NUN5 540 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 FBXO3Q9UK99 471 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 MINK1Q8N4C8 1332 aaPredicted RBP19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 CD163L1Q9NR16 1453 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 CDC42BPGQ6DT37 1551 aa19.69■□□□□ 0.74
COL4A3BP-204ENST00000405807 ABCC3O15438 1527 aa19.68■□□□□ 0.74
COL4A3BP-204ENST00000405807 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
COL4A3BP-204ENST00000405807 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
COL4A3BP-204ENST00000405807 INTS3Q68E01 1043 aaKnown RBP19.68■□□□□ 0.74
COL4A3BP-204ENST00000405807 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
COL4A3BP-204ENST00000405807 HECW2Q9P2P5 1572 aa19.67■□□□□ 0.74
COL4A3BP-204ENST00000405807 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
COL4A3BP-204ENST00000405807 ELL2O00472 640 aaPredicted RBP19.67■□□□□ 0.74
COL4A3BP-204ENST00000405807 ZNF500O60304 480 aaPredicted RBP19.67■□□□□ 0.74
COL4A3BP-204ENST00000405807 TWISTNBQ3B726 338 aaPredicted RBP19.67■□□□□ 0.74
COL4A3BP-204ENST00000405807 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 THUMPD2Q9BTF0 503 aaKnown RBP19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 MBIPQ9NS73 344 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 PIK3C2BO00750 1634 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 ST18O60284 1047 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 NOL7Q9UMY1 257 aaKnown RBP19.66■□□□□ 0.74
COL4A3BP-204ENST00000405807 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
COL4A3BP-204ENST00000405807 SPDYE4A6NLX3 237 aa19.65■□□□□ 0.74
COL4A3BP-204ENST00000405807 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
COL4A3BP-204ENST00000405807 FRMPD1Q5SYB0 1578 aa19.65■□□□□ 0.74
COL4A3BP-204ENST00000405807 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.65■□□□□ 0.74
COL4A3BP-204ENST00000405807 LOC102724159A0A0B4J2E5 919 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 PWP2Q15269 919 aaKnown RBP19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 CSPP1Q1MSJ5 1256 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 RBSNQ9H1K0 784 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 HMOX1P09601 288 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 PDLIM2Q96JY6 352 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 CABP1Q9NZU7 370 aa19.64■□□□□ 0.73
COL4A3BP-204ENST00000405807 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 EP400NLQ6ZTU2 488 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 PTPRMP28827 1452 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 CAPN2P17655 700 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 IDI1Q13907 227 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 TICAM2Q86XR7 235 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 CARD10Q9BWT7 1032 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 CDK19Q9BWU1 502 aa19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
COL4A3BP-204ENST00000405807 ZNF710Q8N1W2 664 aa19.62■□□□□ 0.73
COL4A3BP-204ENST00000405807 TIGD1Q96MW7 591 aa19.62■□□□□ 0.73
COL4A3BP-204ENST00000405807 PRPF40AO75400 957 aaKnown RBP19.62■□□□□ 0.73
COL4A3BP-204ENST00000405807 POGZQ7Z3K3 1410 aa19.62■□□□□ 0.73
COL4A3BP-204ENST00000405807 PRIM1P49642 420 aaKnown RBP19.61■□□□□ 0.73
COL4A3BP-204ENST00000405807 C8orf58Q8NAV2 365 aa19.61■□□□□ 0.73
COL4A3BP-204ENST00000405807 PKP1Q13835 747 aa19.61■□□□□ 0.73
COL4A3BP-204ENST00000405807 MLECQ14165 292 aa19.61■□□□□ 0.73
COL4A3BP-204ENST00000405807 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 C16orf71Q8IYS4 520 aaPredicted RBP19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 ANKRD44Q8N8A2 993 aa19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 REC8O95072 547 aa19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.733e-10■■■■■ 33.9
COL4A3BP-204ENST00000405807 CLTCQ00610 1675 aaKnown RBP19.6■□□□□ 0.73
COL4A3BP-204ENST00000405807 CCDC66A2RUB6 948 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms