RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
PRAME-205ENST00000405655 CT47B1P0C2W7 299 aaPredicted RBP18.01■□□□□ 0.47
PRAME-205ENST00000405655 CHL1O00533 1208 aa18.01■□□□□ 0.47
PRAME-205ENST00000405655 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
PRAME-205ENST00000405655 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
PRAME-205ENST00000405655 IL17REQ8NFR9 667 aa18■□□□□ 0.47
PRAME-205ENST00000405655 PDE4AP27815 886 aa17.99■□□□□ 0.47
PRAME-205ENST00000405655 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
PRAME-205ENST00000405655 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
PRAME-205ENST00000405655 MSH6P52701 1360 aa17.99■□□□□ 0.47
PRAME-205ENST00000405655 MED1Q15648 1581 aaPredicted RBP17.99■□□□□ 0.47
PRAME-205ENST00000405655 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
PRAME-205ENST00000405655 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
PRAME-205ENST00000405655 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
PRAME-205ENST00000405655 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
PRAME-205ENST00000405655 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
PRAME-205ENST00000405655 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
PRAME-205ENST00000405655 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
PRAME-205ENST00000405655 ANKRD24Q8TF21 1146 aa17.97■□□□□ 0.47
PRAME-205ENST00000405655 ALS2Q96Q42 1657 aa17.96■□□□□ 0.46
PRAME-205ENST00000405655 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PRAME-205ENST00000405655 USP19O94966 1318 aa17.95■□□□□ 0.46
PRAME-205ENST00000405655 SLIT3O75094 1523 aa17.95■□□□□ 0.46
PRAME-205ENST00000405655 G2E3Q7L622 706 aa17.94■□□□□ 0.46
PRAME-205ENST00000405655 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
PRAME-205ENST00000405655 KIF16BQ96L93 1317 aa17.94■□□□□ 0.46
PRAME-205ENST00000405655 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
PRAME-205ENST00000405655 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
PRAME-205ENST00000405655 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 BACH2Q9BYV9 841 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 KCNQ3O43525 872 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
PRAME-205ENST00000405655 IPO8O15397 1037 aaKnown RBP17.92■□□□□ 0.46
PRAME-205ENST00000405655 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
PRAME-205ENST00000405655 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
PRAME-205ENST00000405655 PXDNQ92626 1479 aa17.91■□□□□ 0.46
PRAME-205ENST00000405655 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
PRAME-205ENST00000405655 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
PRAME-205ENST00000405655 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
PRAME-205ENST00000405655 F6X3S4 739 aa17.89■□□□□ 0.45
PRAME-205ENST00000405655 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
PRAME-205ENST00000405655 ZBTB7BO15156 539 aaPredicted RBP17.89■□□□□ 0.45
PRAME-205ENST00000405655 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.45
PRAME-205ENST00000405655 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
PRAME-205ENST00000405655 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
PRAME-205ENST00000405655 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
PRAME-205ENST00000405655 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 SLAIN2Q9P270 581 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 NPHP3Q7Z494 1330 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 MS4A1P11836 297 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
PRAME-205ENST00000405655 ABCC4O15439 1325 aa17.86■□□□□ 0.45
PRAME-205ENST00000405655 RGS12O14924 1447 aa17.86■□□□□ 0.45
PRAME-205ENST00000405655 NCOA3Q9Y6Q9 1424 aa17.86■□□□□ 0.45
PRAME-205ENST00000405655 SPATA31A3Q5VYP0 1347 aa17.86■□□□□ 0.45
PRAME-205ENST00000405655 ZNF428Q96B54 188 aa17.86■□□□□ 0.45
PRAME-205ENST00000405655 RWDD1Q9H446 243 aaPredicted RBP17.86■□□□□ 0.45
PRAME-205ENST00000405655 DCCP43146 1447 aa17.85■□□□□ 0.45
PRAME-205ENST00000405655 ERBB3P21860 1342 aa17.85■□□□□ 0.45
PRAME-205ENST00000405655 KIAA0232Q92628 1395 aa17.85■□□□□ 0.45
PRAME-205ENST00000405655 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
PRAME-205ENST00000405655 TNS3Q68CZ2 1445 aa17.85■□□□□ 0.45
PRAME-205ENST00000405655 SIRT2Q8IXJ6 389 aa17.84■□□□□ 0.45
PRAME-205ENST00000405655 COL18A1P39060 1754 aa17.84■□□□□ 0.45
PRAME-205ENST00000405655 ANXA1P04083 346 aa17.83■□□□□ 0.45
PRAME-205ENST00000405655 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.45
PRAME-205ENST00000405655 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
PRAME-205ENST00000405655 SEC24BO95487 1268 aa17.83■□□□□ 0.44
PRAME-205ENST00000405655 CSB-PGBD3P0DP91 1061 aa17.83■□□□□ 0.44
PRAME-205ENST00000405655 SLC4A10Q6U841 1118 aa17.83■□□□□ 0.44
PRAME-205ENST00000405655 HTATSF1O43719 755 aaKnown RBP17.82■□□□□ 0.44
PRAME-205ENST00000405655 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
PRAME-205ENST00000405655 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
PRAME-205ENST00000405655 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
PRAME-205ENST00000405655 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
PRAME-205ENST00000405655 CEMIPQ8WUJ3 1361 aa17.8■□□□□ 0.44
PRAME-205ENST00000405655 MEIS3Q99687 375 aa17.8■□□□□ 0.44
PRAME-205ENST00000405655 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
PRAME-205ENST00000405655 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
PRAME-205ENST00000405655 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
PRAME-205ENST00000405655 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
PRAME-205ENST00000405655 MEGF6O75095 1541 aa17.79■□□□□ 0.44
PRAME-205ENST00000405655 LMO7Q8WWI1 1683 aa17.79■□□□□ 0.44
PRAME-205ENST00000405655 FAM161AQ3B820 660 aa17.79■□□□□ 0.44
PRAME-205ENST00000405655 LNPKQ9C0E8 428 aa17.79■□□□□ 0.44
PRAME-205ENST00000405655 BTBD11A6QL63 1104 aa17.78■□□□□ 0.44
PRAME-205ENST00000405655 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
PRAME-205ENST00000405655 TEFQ10587 303 aa17.77■□□□□ 0.44
PRAME-205ENST00000405655 SLC39A6Q13433 755 aa17.77■□□□□ 0.44
PRAME-205ENST00000405655 AAMPQ13685 434 aa17.77■□□□□ 0.44
PRAME-205ENST00000405655 C1orf141Q5JVX7 400 aa17.77■□□□□ 0.44
PRAME-205ENST00000405655 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.44
PRAME-205ENST00000405655 NCAPD2Q15021 1401 aa17.77■□□□□ 0.44
PRAME-205ENST00000405655 CAMTA1Q9Y6Y1 1673 aa17.76■□□□□ 0.43
PRAME-205ENST00000405655 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
PRAME-205ENST00000405655 SOS2Q07890 1332 aaPredicted RBP17.75■□□□□ 0.43
PRAME-205ENST00000405655 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms