RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 SRCIN1Q9C0H9 1055 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 NAT10Q9H0A0 1025 aaKnown RBP8.79□□□□□ -1
HDAC9-202ENST00000405010 IL1RAPL2Q9NP60 686 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 ADGRL2O95490 1459 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
HDAC9-202ENST00000405010 KIF18AQ8NI77 898 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 LARP6Q9BRS8 491 aaKnown RBP8.79□□□□□ -1
HDAC9-202ENST00000405010 CHMP4AQ9BY43 222 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 EIF2AK4Q9P2K8 1649 aaKnown RBP8.79□□□□□ -1
HDAC9-202ENST00000405010 MAGI2Q86UL8 1455 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 STX6O43752 255 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 SMC2O95347 1197 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 DMTNQ08495 405 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 PLPPR3Q6T4P5 718 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 CCDC186Q7Z3E2 898 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 CNPY2Q9Y2B0 182 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 ITSN2Q9NZM3 1697 aa8.79□□□□□ -1
HDAC9-202ENST00000405010 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 NOM1Q5C9Z4 860 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 CLIP2Q9UDT6 1046 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 HSP90AB4PQ58FF6 505 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 TSHZ3Q63HK5 1081 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 JAKMIP1Q96N16 626 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 PSMA5P28066 241 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 GPT2Q8TD30 523 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 OGFRQ9NZT2 677 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 KDM4AO75164 1064 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 CASTP20810 708 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 DCTN1Q14203 1278 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 UBXN4Q92575 508 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 PDRG1Q9NUG6 133 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 TRMT1Q9NXH9 659 aaKnown RBP8.78□□□□□ -1
HDAC9-202ENST00000405010 LIMCH1Q9UPQ0 1083 aa8.78□□□□□ -1
HDAC9-202ENST00000405010 AMPHP49418 695 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 CLASRPQ8N2M8 674 aaKnown RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 ZSCAN31Q96LW9 406 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 LAMC3Q9Y6N6 1575 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 NUTM2FA1L443 756 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 ZSCAN22P10073 491 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 CWC27Q6UX04 472 aaKnown RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 DCTPP1Q9H773 170 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 RAPGEF6Q8TEU7 1601 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
HDAC9-202ENST00000405010 ANKRD44Q8N8A2 993 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 PRAM1Q96QH2 718 aa8.77□□□□□ -1.01
HDAC9-202ENST00000405010 KIF2AO00139 706 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-202ENST00000405010 PTGS1P23219 599 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 TSPYL1Q9H0U9 437 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 C9orf78Q9NZ63 289 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-202ENST00000405010 PPP6R1Q9UPN7 881 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 ABCC2Q92887 1545 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 GTF2F1P35269 517 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC9-202ENST00000405010 ZNF165P49910 485 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 HSP90B2PQ58FF3 399 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 TMCO3Q6UWJ1 677 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 FAM200AQ8TCP9 573 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 AK7Q96M32 723 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 MBIPQ9NS73 344 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 NSD2O96028 1365 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 PDE1AP54750 535 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 STK3Q13188 491 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 SULT6B1Q6IMI4 303 aa8.76□□□□□ -1.01
HDAC9-202ENST00000405010 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC9-202ENST00000405010 V9GYY5 206 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-202ENST00000405010 POLR3GO15318 223 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 LEKR1Q6ZMV7 388 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 ESYT1Q9BSJ8 1104 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 SCAND2PQ9GZW5 306 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 VAMP4O75379 141 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 ANAPC15P60006 121 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 TSPYL6Q8N831 410 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 OTUD7AQ8TE49 926 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 LTV1Q96GA3 475 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 NOL10Q9BSC4 688 aaKnown RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 SMTNL1A8MU46 457 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 CEP57L1Q8IYX8 460 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 SHANK2Q9UPX8 1470 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 F6X3S4 739 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 CCP110O43303 1012 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 MEIS3Q99687 375 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 TFIP11Q9UBB9 837 aaKnown RBP8.75□□□□□ -1.01
HDAC9-202ENST00000405010 KIF21AQ7Z4S6 1674 aa8.75□□□□□ -1.01
HDAC9-202ENST00000405010 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-202ENST00000405010 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
HDAC9-202ENST00000405010 BLOC1S2Q6QNY1 142 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms