RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 AMER1Q5JTC6 1135 aaPredicted RBP22.5■■□□□ 1.19
CGREF1-205ENST00000404694 MORC1Q86VD1 984 aa22.5■■□□□ 1.19
CGREF1-205ENST00000404694 PLSCR1O15162 318 aa22.49■■□□□ 1.19
CGREF1-205ENST00000404694 DDX54Q8TDD1 881 aaKnown RBP22.49■■□□□ 1.19
CGREF1-205ENST00000404694 RAPGEF4Q8WZA2 1011 aa22.49■■□□□ 1.19
CGREF1-205ENST00000404694 PER1O15534 1290 aaPredicted RBP22.48■■□□□ 1.19
CGREF1-205ENST00000404694 KCNQ2O43526 872 aa22.48■■□□□ 1.19
CGREF1-205ENST00000404694 ZCRB1Q8TBF4 217 aaKnown RBP22.48■■□□□ 1.19
CGREF1-205ENST00000404694 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
CGREF1-205ENST00000404694 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
CGREF1-205ENST00000404694 BTAF1O14981 1849 aa22.47■■□□□ 1.19
CGREF1-205ENST00000404694 KAT6BQ8WYB5 2073 aa22.46■■□□□ 1.19
CGREF1-205ENST00000404694 PKD1L3Q7Z443 1732 aa22.46■■□□□ 1.19
CGREF1-205ENST00000404694 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
CGREF1-205ENST00000404694 TATP17735 454 aaPredicted RBP22.46■■□□□ 1.19
CGREF1-205ENST00000404694 EIF4A2Q14240 407 aaKnown RBP22.44■■□□□ 1.18
CGREF1-205ENST00000404694 EYA1Q99502 592 aa22.44■■□□□ 1.18
CGREF1-205ENST00000404694 R3HDM1Q15032 1099 aaKnown RBP22.43■■□□□ 1.18
CGREF1-205ENST00000404694 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
CGREF1-205ENST00000404694 PCDH11XQ9BZA7 1347 aa22.41■■□□□ 1.18
CGREF1-205ENST00000404694 PCDH11YQ9BZA8 1340 aa22.41■■□□□ 1.18
CGREF1-205ENST00000404694 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.18
CGREF1-205ENST00000404694 PROM2Q8N271 834 aa22.39■■□□□ 1.18
CGREF1-205ENST00000404694 NPC1L1Q9UHC9 1359 aa22.39■■□□□ 1.17
CGREF1-205ENST00000404694 IGSF1Q8N6C5 1336 aa22.39■■□□□ 1.17
CGREF1-205ENST00000404694 NBPF14Q5TI25 921 aa22.38■■□□□ 1.17
CGREF1-205ENST00000404694 LRP5O75197 1615 aa22.38■■□□□ 1.17
CGREF1-205ENST00000404694 TXNRD1Q16881 649 aa22.38■■□□□ 1.17
CGREF1-205ENST00000404694 TOGARAM1Q9Y4F4 1720 aa22.36■■□□□ 1.17
CGREF1-205ENST00000404694 CYP27B1O15528 508 aa22.36■■□□□ 1.17
CGREF1-205ENST00000404694 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
CGREF1-205ENST00000404694 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
CGREF1-205ENST00000404694 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
CGREF1-205ENST00000404694 PLEKHG2Q9H7P9 1386 aa22.34■■□□□ 1.17
CGREF1-205ENST00000404694 SPG7Q9UQ90 795 aa22.34■■□□□ 1.17
CGREF1-205ENST00000404694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.33■■□□□ 1.17
CGREF1-205ENST00000404694 PAPPAQ13219 1627 aa22.33■■□□□ 1.16
CGREF1-205ENST00000404694 LY75O60449 1722 aa22.32■■□□□ 1.16
CGREF1-205ENST00000404694 MTHFSP49914 203 aa22.32■■□□□ 1.16
CGREF1-205ENST00000404694 ITGB4P16144 1822 aa22.31■■□□□ 1.16
CGREF1-205ENST00000404694 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
CGREF1-205ENST00000404694 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
CGREF1-205ENST00000404694 IL13P35225 146 aa22.3■■□□□ 1.16
CGREF1-205ENST00000404694 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
CGREF1-205ENST00000404694 CASZ1Q86V15 1759 aa22.28■■□□□ 1.16
CGREF1-205ENST00000404694 KDRP35968 1356 aa22.28■■□□□ 1.16
CGREF1-205ENST00000404694 NKX1-1Q15270 411 aaPredicted RBP22.27■■□□□ 1.16
CGREF1-205ENST00000404694 LRRC4BQ9NT99 713 aa22.27■■□□□ 1.16
CGREF1-205ENST00000404694 PHKG2P15735 406 aa22.26■■□□□ 1.15
CGREF1-205ENST00000404694 IFNL2Q8IZJ0 200 aa22.26■■□□□ 1.15
CGREF1-205ENST00000404694 COL3A1P02461 1466 aaPredicted RBP22.26■■□□□ 1.15
CGREF1-205ENST00000404694 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
CGREF1-205ENST00000404694 STK32BQ9NY57 414 aa22.25■■□□□ 1.15
CGREF1-205ENST00000404694 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
CGREF1-205ENST00000404694 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
CGREF1-205ENST00000404694 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
CGREF1-205ENST00000404694 DIAPH1O60610 1272 aaKnown RBP22.23■■□□□ 1.15
CGREF1-205ENST00000404694 PLEKHO1Q53GL0 409 aaPredicted RBP22.23■■□□□ 1.15
CGREF1-205ENST00000404694 KCNQ4P56696 695 aa22.21■■□□□ 1.15
CGREF1-205ENST00000404694 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
CGREF1-205ENST00000404694 PALLDQ8WX93 1383 aa22.2■■□□□ 1.14
CGREF1-205ENST00000404694 ZNF827Q17R98 1081 aa22.2■■□□□ 1.14
CGREF1-205ENST00000404694 PDGFDQ9GZP0 370 aaPredicted RBP22.2■■□□□ 1.14
CGREF1-205ENST00000404694 QSER1Q2KHR3 1735 aa22.19■■□□□ 1.14
CGREF1-205ENST00000404694 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
CGREF1-205ENST00000404694 PIGBQ92521 554 aa22.19■■□□□ 1.14
CGREF1-205ENST00000404694 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
CGREF1-205ENST00000404694 TUBGCP6Q96RT7 1819 aa22.19■■□□□ 1.14
CGREF1-205ENST00000404694 C5P01031 1676 aa22.18■■□□□ 1.14
CGREF1-205ENST00000404694 HMOX1P09601 288 aa22.18■■□□□ 1.14
CGREF1-205ENST00000404694 KDM6AO15550 1401 aaPredicted RBP22.18■■□□□ 1.14
CGREF1-205ENST00000404694 HSP90AB1P08238 724 aaKnown RBP22.17■■□□□ 1.14
CGREF1-205ENST00000404694 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
CGREF1-205ENST00000404694 TMOD3Q9NYL9 352 aa22.17■■□□□ 1.14
CGREF1-205ENST00000404694 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
CGREF1-205ENST00000404694 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
CGREF1-205ENST00000404694 SMARCC1Q92922 1105 aaPredicted RBP22.15■■□□□ 1.14
CGREF1-205ENST00000404694 DCAF5Q96JK2 942 aa22.15■■□□□ 1.14
CGREF1-205ENST00000404694 SPON1Q9HCB6 807 aa22.15■■□□□ 1.14
CGREF1-205ENST00000404694 C1orf141Q5JVX7 400 aa22.14■■□□□ 1.14
CGREF1-205ENST00000404694 SCN11AQ9UI33 1791 aa22.13■■□□□ 1.13
CGREF1-205ENST00000404694 ERVV-2B6SEH9 535 aa22.12■■□□□ 1.13
CGREF1-205ENST00000404694 U2SURPO15042 1029 aaKnown RBP22.12■■□□□ 1.13
CGREF1-205ENST00000404694 ZBTB7AO95365 584 aa22.12■■□□□ 1.13
CGREF1-205ENST00000404694 CFAP53Q96M91 514 aa22.12■■□□□ 1.13
CGREF1-205ENST00000404694 VIRMAQ69YN4 1812 aaKnown RBP22.12■■□□□ 1.13
CGREF1-205ENST00000404694 ANP32CO43423 234 aa22.12■■□□□ 1.13
CGREF1-205ENST00000404694 ASAP1Q9ULH1 1129 aa22.11■■□□□ 1.13
CGREF1-205ENST00000404694 PNPLA7Q6ZV29 1317 aa22.1■■□□□ 1.13
CGREF1-205ENST00000404694 AKAP4Q5JQC9 854 aa22.1■■□□□ 1.13
CGREF1-205ENST00000404694 TFCP2L1Q9NZI6 479 aa22.1■■□□□ 1.13
CGREF1-205ENST00000404694 C4BP0C0L5 1744 aa22.1■■□□□ 1.13
CGREF1-205ENST00000404694 ATG3Q9NT62 314 aa22.09■■□□□ 1.13
CGREF1-205ENST00000404694 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.12
CGREF1-205ENST00000404694 LOC102724428A0A0B4J2F2 783 aa22.08■■□□□ 1.12
CGREF1-205ENST00000404694 SIK1P57059 783 aa22.08■■□□□ 1.12
CGREF1-205ENST00000404694 MTFR1LQ9H019 292 aa22.08■■□□□ 1.12
CGREF1-205ENST00000404694 CABP4P57796 275 aa22.07■■□□□ 1.12
CGREF1-205ENST00000404694 MTHFSDQ2M296 383 aaKnown RBP22.07■■□□□ 1.12
CGREF1-205ENST00000404694 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms