RNA–Protein interactions for RNA: ENST00000404084.5

VIT-205, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VIT, Length 2,438 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-205ENST00000404084 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
VIT-205ENST00000404084 KDRP35968 1356 aa13.24□□□□□ -0.29
VIT-205ENST00000404084 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
VIT-205ENST00000404084 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
VIT-205ENST00000404084 PXDNQ92626 1479 aa13.23□□□□□ -0.29
VIT-205ENST00000404084 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
VIT-205ENST00000404084 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
VIT-205ENST00000404084 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
VIT-205ENST00000404084 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
VIT-205ENST00000404084 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
VIT-205ENST00000404084 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
VIT-205ENST00000404084 MED1Q15648 1581 aaPredicted RBP13.2□□□□□ -0.3
VIT-205ENST00000404084 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
VIT-205ENST00000404084 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
VIT-205ENST00000404084 PLIN1O60240 522 aa13.19□□□□□ -0.3
VIT-205ENST00000404084 RGS3P49796 1198 aa13.19□□□□□ -0.3
VIT-205ENST00000404084 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
VIT-205ENST00000404084 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
VIT-205ENST00000404084 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
VIT-205ENST00000404084 GNAI1P63096 354 aa13.18□□□□□ -0.3
VIT-205ENST00000404084 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
VIT-205ENST00000404084 TPM2P07951 284 aa13.18□□□□□ -0.3
VIT-205ENST00000404084 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
VIT-205ENST00000404084 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
VIT-205ENST00000404084 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
VIT-205ENST00000404084 BCAR3O75815 825 aa13.17□□□□□ -0.3
VIT-205ENST00000404084 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
VIT-205ENST00000404084 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
VIT-205ENST00000404084 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
VIT-205ENST00000404084 ANKRD24Q8TF21 1146 aa13.17□□□□□ -0.3
VIT-205ENST00000404084 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
VIT-205ENST00000404084 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
VIT-205ENST00000404084 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
VIT-205ENST00000404084 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
VIT-205ENST00000404084 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
VIT-205ENST00000404084 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
VIT-205ENST00000404084 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
VIT-205ENST00000404084 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
VIT-205ENST00000404084 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
VIT-205ENST00000404084 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
VIT-205ENST00000404084 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
VIT-205ENST00000404084 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
VIT-205ENST00000404084 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
VIT-205ENST00000404084 CPDO75976 1380 aa13.14□□□□□ -0.31
VIT-205ENST00000404084 ERBB3P21860 1342 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 MCM10Q7L590 875 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 ABCC6O95255 1503 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
VIT-205ENST00000404084 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
VIT-205ENST00000404084 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
VIT-205ENST00000404084 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
VIT-205ENST00000404084 RGPD2P0DJD1 1756 aa13.11□□□□□ -0.31
VIT-205ENST00000404084 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
VIT-205ENST00000404084 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 CHL1O00533 1208 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
VIT-205ENST00000404084 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 COL18A1P39060 1754 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 RGPD5Q99666 1765 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 CRB1P82279 1406 aa13.1□□□□□ -0.31
VIT-205ENST00000404084 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 XRCC6P12956 609 aaKnown RBP eCLIP13.09□□□□□ -0.31
VIT-205ENST00000404084 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 NLRP2Q9NX02 1062 aa13.09□□□□□ -0.31
VIT-205ENST00000404084 VAMP4O75379 141 aa13.08□□□□□ -0.32
VIT-205ENST00000404084 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
VIT-205ENST00000404084 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
VIT-205ENST00000404084 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 BBXQ8WY36 941 aaPredicted RBP13.07□□□□□ -0.32
VIT-205ENST00000404084 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
VIT-205ENST00000404084 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
VIT-205ENST00000404084 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
VIT-205ENST00000404084 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
VIT-205ENST00000404084 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
VIT-205ENST00000404084 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
VIT-205ENST00000404084 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
VIT-205ENST00000404084 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
VIT-205ENST00000404084 FAM208AQ9UK61 1670 aaKnown RBP13.06□□□□□ -0.32
VIT-205ENST00000404084 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
VIT-205ENST00000404084 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
VIT-205ENST00000404084 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
VIT-205ENST00000404084 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms