RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 GLI3P10071 1580 aa8.27□□□□□ -1.09
CEACAM1-207ENST00000403444 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 NPM3O75607 178 aaKnown RBP8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 IGHDP01880 384 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 USP19O94966 1318 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 MTHFSP49914 203 aa8.26□□□□□ -1.09
CEACAM1-207ENST00000403444 SEC24BO95487 1268 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 PDE3BQ13370 1112 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 DUSP27Q5VZP5 1158 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 UPF2Q9HAU5 1272 aaKnown RBP8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 POGKQ9P215 609 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 PLEKHG2Q9H7P9 1386 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 TCP11L2Q8N4U5 519 aa8.25□□□□□ -1.09
CEACAM1-207ENST00000403444 KDM3BQ7LBC6 1761 aa8.24□□□□□ -1.09
CEACAM1-207ENST00000403444 KIF24Q5T7B8 1368 aa8.24□□□□□ -1.09
CEACAM1-207ENST00000403444 SMC4Q9NTJ3 1288 aa8.24□□□□□ -1.09
CEACAM1-207ENST00000403444 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
CEACAM1-207ENST00000403444 UBR2Q8IWV8 1755 aa8.24□□□□□ -1.09
CEACAM1-207ENST00000403444 THUMPD2Q9BTF0 503 aaKnown RBP8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 HMOX1P09601 288 aa8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 HSPA2P54652 639 aa8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 CENPQQ7L2Z9 268 aaPredicted RBP8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 ZNF428Q96B54 188 aa8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 PRDM10Q9NQV6 1147 aa8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 ZNF335Q9H4Z2 1342 aaPredicted RBP8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
CEACAM1-207ENST00000403444 MAPK8IP3Q9UPT6 1336 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 TNS3Q68CZ2 1445 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 SCN11AQ9UI33 1791 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 TOGARAM1Q9Y4F4 1720 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 ZNF831Q5JPB2 1677 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 THSD7AQ9UPZ6 1657 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
CEACAM1-207ENST00000403444 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.09
CEACAM1-207ENST00000403444 TMEM51Q9NW97 253 aa8.21□□□□□ -1.09
CEACAM1-207ENST00000403444 RTL1A6NKG5 1358 aa8.21□□□□□ -1.09
CEACAM1-207ENST00000403444 RLBP1P12271 317 aa8.21□□□□□ -1.1
CEACAM1-207ENST00000403444 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
CEACAM1-207ENST00000403444 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 FOXD4L5Q5VV16 416 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 FOXD4L4Q8WXT5 416 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 LNPKQ9C0E8 428 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 CCDC61Q9Y6R9 512 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 SOS2Q07890 1332 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 LRP6O75581 1613 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 CHRM1P11229 460 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 MAPK8IP2Q13387 824 aaPredicted RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 FYB1O15117 783 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
CEACAM1-207ENST00000403444 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 CPDO75976 1380 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 ARID3AQ99856 593 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 RREB1Q92766 1687 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 E9PSI1 815 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 EXOSC9Q06265 439 aaKnown RBP8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 NOL8Q76FK4 1167 aaKnown RBP8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 ACEP12821 1306 aa8.19□□□□□ -1.1
CEACAM1-207ENST00000403444 MRC1P22897 1456 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 MS4A1P11836 297 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 BECN1Q14457 450 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 CGNL1Q0VF96 1302 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 C8orf34Q49A92 452 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 RNF123Q5XPI4 1314 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 KDRP35968 1356 aa8.18□□□□□ -1.1
CEACAM1-207ENST00000403444 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 RNF216Q9NWF9 866 aaPredicted RBP8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 TTC21BQ7Z4L5 1316 aa8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 CLCN1P35523 988 aa8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 MSH6P52701 1360 aa8.17□□□□□ -1.1
CEACAM1-207ENST00000403444 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 PATL2C9JE40 543 aaKnown RBP8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 RIPK4P57078 832 aa8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 TAOK2Q9UL54 1235 aa8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
CEACAM1-207ENST00000403444 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 DNTTIP2Q5QJE6 756 aaKnown RBP8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 ANKRD45Q5TZF3 282 aa8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 BRINP3Q76B58 766 aa8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 SMAP1Q8IYB5 467 aaPredicted RBP8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 RGS22Q8NE09 1264 aa8.15□□□□□ -1.1
CEACAM1-207ENST00000403444 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
CEACAM1-207ENST00000403444 SBF2Q86WG5 1849 aa8.14□□□□□ -1.11
CEACAM1-207ENST00000403444 TPM2P07951 284 aa8.14□□□□□ -1.11
CEACAM1-207ENST00000403444 RUNDC1Q96C34 613 aa8.14□□□□□ -1.11
CEACAM1-207ENST00000403444 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms