RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 STRN4Q9NRL3 753 aa25.4■■□□□ 1.66
PARVB-202ENST00000402876 PKD1L3Q7Z443 1732 aa25.4■■□□□ 1.66
PARVB-202ENST00000402876 CRB1P82279 1406 aa25.39■■□□□ 1.66
PARVB-202ENST00000402876 AMOTQ4VCS5 1084 aa25.39■■□□□ 1.66
PARVB-202ENST00000402876 PLEKHO1Q53GL0 409 aaPredicted RBP25.39■■□□□ 1.66
PARVB-202ENST00000402876 TATP17735 454 aaPredicted RBP25.38■■□□□ 1.65
PARVB-202ENST00000402876 CARD10Q9BWT7 1032 aa25.38■■□□□ 1.65
PARVB-202ENST00000402876 VIRMAQ69YN4 1812 aaKnown RBP25.37■■□□□ 1.65
PARVB-202ENST00000402876 MAP3K5Q99683 1374 aa25.36■■□□□ 1.65
PARVB-202ENST00000402876 HTATSF1O43719 755 aaKnown RBP25.36■■□□□ 1.65
PARVB-202ENST00000402876 LARP1Q6PKG0 1096 aaKnown RBP25.36■■□□□ 1.65
PARVB-202ENST00000402876 TRMT2AQ8IZ69 625 aaKnown RBP25.36■■□□□ 1.65
PARVB-202ENST00000402876 MEGF6O75095 1541 aa25.36■■□□□ 1.65
PARVB-202ENST00000402876 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
PARVB-202ENST00000402876 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
PARVB-202ENST00000402876 DUSP27Q5VZP5 1158 aa25.35■■□□□ 1.65
PARVB-202ENST00000402876 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
PARVB-202ENST00000402876 MYH16Q9H6N6 1097 aa25.35■■□□□ 1.65
PARVB-202ENST00000402876 SLIT2O94813 1529 aa25.34■■□□□ 1.65
PARVB-202ENST00000402876 GNAT3A8MTJ3 354 aa25.34■■□□□ 1.65
PARVB-202ENST00000402876 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
PARVB-202ENST00000402876 OVOS2A0A0G2JMS6 1433 aa25.32■■□□□ 1.64
PARVB-202ENST00000402876 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
PARVB-202ENST00000402876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.32■■□□□ 1.64
PARVB-202ENST00000402876 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
PARVB-202ENST00000402876 LRP6O75581 1613 aa25.32■■□□□ 1.64
PARVB-202ENST00000402876 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.31■■□□□ 1.64
PARVB-202ENST00000402876 AKAP4Q5JQC9 854 aa25.3■■□□□ 1.64
PARVB-202ENST00000402876 C1orf141Q5JVX7 400 aa25.3■■□□□ 1.64
PARVB-202ENST00000402876 GNAI1P63096 354 aa25.29■■□□□ 1.64
PARVB-202ENST00000402876 IL2RBP14784 551 aa25.28■■□□□ 1.64
PARVB-202ENST00000402876 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
PARVB-202ENST00000402876 THUMPD2Q9BTF0 503 aaKnown RBP25.28■■□□□ 1.64
PARVB-202ENST00000402876 IFT57Q9NWB7 429 aa25.28■■□□□ 1.64
PARVB-202ENST00000402876 MCM10Q7L590 875 aa25.27■■□□□ 1.64
PARVB-202ENST00000402876 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
PARVB-202ENST00000402876 ADAMTS7Q9UKP4 1686 aa25.26■■□□□ 1.63
PARVB-202ENST00000402876 SCN11AQ9UI33 1791 aa25.26■■□□□ 1.63
PARVB-202ENST00000402876 C8orf37Q96NL8 207 aa25.26■■□□□ 1.63
PARVB-202ENST00000402876 SHANK3Q9BYB0 1731 aa25.26■■□□□ 1.63
PARVB-202ENST00000402876 MEX3CQ5U5Q3 659 aaKnown RBP25.25■■□□□ 1.63
PARVB-202ENST00000402876 FANCIQ9NVI1 1328 aa25.25■■□□□ 1.63
PARVB-202ENST00000402876 CFAP44Q96MT7 982 aa25.24■■□□□ 1.63
PARVB-202ENST00000402876 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
PARVB-202ENST00000402876 ZNF853P0CG23 659 aa25.23■■□□□ 1.63
PARVB-202ENST00000402876 UNC5CLQ8IV45 518 aa25.23■■□□□ 1.63
PARVB-202ENST00000402876 USP35Q9P2H5 1018 aa25.23■■□□□ 1.63
PARVB-202ENST00000402876 RCAN3Q9UKA8 241 aa25.23■■□□□ 1.63
PARVB-202ENST00000402876 DISP2A7MBM2 1401 aa25.22■■□□□ 1.63
PARVB-202ENST00000402876 ZCRB1Q8TBF4 217 aaKnown RBP25.22■■□□□ 1.63
PARVB-202ENST00000402876 THRAP3Q9Y2W1 955 aaKnown RBP25.22■■□□□ 1.63
PARVB-202ENST00000402876 CEMIPQ8WUJ3 1361 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 SPATA31A1Q5TZJ5 1347 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 PCDH11XQ9BZA7 1347 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 PCDH11YQ9BZA8 1340 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 FNBP4Q8N3X1 1017 aaPredicted RBP25.21■■□□□ 1.63
PARVB-202ENST00000402876 TSR2Q969E8 191 aaKnown RBP25.21■■□□□ 1.63
PARVB-202ENST00000402876 BCL9LQ86UU0 1499 aa25.21■■□□□ 1.63
PARVB-202ENST00000402876 SIPA1L3O60292 1781 aaPredicted RBP25.21■■□□□ 1.63
PARVB-202ENST00000402876 PHKG2P15735 406 aa25.2■■□□□ 1.62
PARVB-202ENST00000402876 IL17REQ8NFR9 667 aa25.2■■□□□ 1.62
PARVB-202ENST00000402876 SUPT16HQ9Y5B9 1047 aaKnown RBP25.2■■□□□ 1.62
PARVB-202ENST00000402876 SPATA31A5Q5VU36 1347 aa25.19■■□□□ 1.62
PARVB-202ENST00000402876 SPATA31A7Q8IWB4 1347 aa25.19■■□□□ 1.62
PARVB-202ENST00000402876 HSP90AB1P08238 724 aaKnown RBP25.19■■□□□ 1.62
PARVB-202ENST00000402876 CDCA7Q9BWT1 371 aaPredicted RBP25.19■■□□□ 1.62
PARVB-202ENST00000402876 RNMTO43148 476 aaKnown RBP25.18■■□□□ 1.62
PARVB-202ENST00000402876 CT47B1P0C2W7 299 aaPredicted RBP25.18■■□□□ 1.62
PARVB-202ENST00000402876 MBIPQ9NS73 344 aa25.18■■□□□ 1.62
PARVB-202ENST00000402876 CHL1O00533 1208 aa25.17■■□□□ 1.62
PARVB-202ENST00000402876 MPRIPQ6WCQ1 1025 aa25.17■■□□□ 1.62
PARVB-202ENST00000402876 BABAM1Q9NWV8 329 aa25.17■■□□□ 1.62
PARVB-202ENST00000402876 CCDC9Q9Y3X0 531 aaKnown RBP25.17■■□□□ 1.62
PARVB-202ENST00000402876 KDM3BQ7LBC6 1761 aa25.17■■□□□ 1.62
PARVB-202ENST00000402876 EXOSC9Q06265 439 aaKnown RBP25.16■■□□□ 1.62
PARVB-202ENST00000402876 VPS72Q15906 364 aa25.16■■□□□ 1.62
PARVB-202ENST00000402876 CYP27B1O15528 508 aa25.15■■□□□ 1.62
PARVB-202ENST00000402876 TEFQ10587 303 aa25.15■■□□□ 1.62
PARVB-202ENST00000402876 LGR6Q9HBX8 967 aa25.15■■□□□ 1.62
PARVB-202ENST00000402876 USP21Q9UK80 565 aa25.15■■□□□ 1.62
PARVB-202ENST00000402876 KDM6AO15550 1401 aaPredicted RBP25.14■■□□□ 1.62
PARVB-202ENST00000402876 NEFLP07196 543 aa25.14■■□□□ 1.62
PARVB-202ENST00000402876 TAF7Q15545 349 aaPredicted RBP25.14■■□□□ 1.62
PARVB-202ENST00000402876 DCAF5Q96JK2 942 aa25.14■■□□□ 1.62
PARVB-202ENST00000402876 TNS2Q63HR2 1409 aa25.13■■□□□ 1.61
PARVB-202ENST00000402876 BARGINQ6ZT62 677 aa25.13■■□□□ 1.61
PARVB-202ENST00000402876 TSPYL4Q9UJ04 414 aa25.13■■□□□ 1.61
PARVB-202ENST00000402876 MRC1P22897 1456 aa25.13■■□□□ 1.61
PARVB-202ENST00000402876 AFF2P51816 1311 aa25.12■■□□□ 1.61
PARVB-202ENST00000402876 RNF123Q5XPI4 1314 aa25.11■■□□□ 1.61
PARVB-202ENST00000402876 EXOC5O00471 708 aa25.09■■□□□ 1.61
PARVB-202ENST00000402876 NKX1-1Q15270 411 aaPredicted RBP25.09■■□□□ 1.61
PARVB-202ENST00000402876 DDX54Q8TDD1 881 aaKnown RBP25.09■■□□□ 1.61
PARVB-202ENST00000402876 ZNF428Q96B54 188 aa25.07■■□□□ 1.6
PARVB-202ENST00000402876 MIS18AQ9NYP9 233 aa25.07■■□□□ 1.6
PARVB-202ENST00000402876 TOGARAM1Q9Y4F4 1720 aa25.06■■□□□ 1.6
PARVB-202ENST00000402876 RRP1P56182 461 aaKnown RBP25.06■■□□□ 1.6
PARVB-202ENST00000402876 SLC52A2Q9HAB3 445 aa25.06■■□□□ 1.6
PARVB-202ENST00000402876 ATRNO75882 1429 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms