RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
FAM49B-201ENST00000401979 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
FAM49B-201ENST00000401979 SPATA31A6Q5VVP1 1343 aa20.35■□□□□ 0.85
FAM49B-201ENST00000401979 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
FAM49B-201ENST00000401979 MCM10Q7L590 875 aa20.35■□□□□ 0.85
FAM49B-201ENST00000401979 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
FAM49B-201ENST00000401979 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
FAM49B-201ENST00000401979 TRMT2AQ8IZ69 625 aaKnown RBP20.34■□□□□ 0.85
FAM49B-201ENST00000401979 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
FAM49B-201ENST00000401979 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
FAM49B-201ENST00000401979 CRB1P82279 1406 aa20.34■□□□□ 0.85
FAM49B-201ENST00000401979 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
FAM49B-201ENST00000401979 PLCH1Q4KWH8 1693 aa20.34■□□□□ 0.85
FAM49B-201ENST00000401979 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.85
FAM49B-201ENST00000401979 MEGF6O75095 1541 aa20.32■□□□□ 0.84
FAM49B-201ENST00000401979 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
FAM49B-201ENST00000401979 C8orf37Q96NL8 207 aa20.32■□□□□ 0.84
FAM49B-201ENST00000401979 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
FAM49B-201ENST00000401979 GNAI1P63096 354 aa20.31■□□□□ 0.84
FAM49B-201ENST00000401979 TSR2Q969E8 191 aaKnown RBP20.31■□□□□ 0.84
FAM49B-201ENST00000401979 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
FAM49B-201ENST00000401979 RCAN3Q9UKA8 241 aa20.31■□□□□ 0.84
FAM49B-201ENST00000401979 AKAP4Q5JQC9 854 aa20.3■□□□□ 0.84
FAM49B-201ENST00000401979 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
FAM49B-201ENST00000401979 IL2RBP14784 551 aa20.29■□□□□ 0.84
FAM49B-201ENST00000401979 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
FAM49B-201ENST00000401979 IFT57Q9NWB7 429 aa20.29■□□□□ 0.84
FAM49B-201ENST00000401979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
FAM49B-201ENST00000401979 PARP4Q9UKK3 1724 aaKnown RBP20.28■□□□□ 0.84
FAM49B-201ENST00000401979 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
FAM49B-201ENST00000401979 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
FAM49B-201ENST00000401979 NEFLP07196 543 aa20.27■□□□□ 0.84
FAM49B-201ENST00000401979 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
FAM49B-201ENST00000401979 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.83
FAM49B-201ENST00000401979 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
FAM49B-201ENST00000401979 SLIT2O94813 1529 aa20.26■□□□□ 0.83
FAM49B-201ENST00000401979 NRAPQ86VF7 1730 aa20.25■□□□□ 0.83
FAM49B-201ENST00000401979 LRP6O75581 1613 aa20.25■□□□□ 0.83
FAM49B-201ENST00000401979 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
FAM49B-201ENST00000401979 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
FAM49B-201ENST00000401979 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
FAM49B-201ENST00000401979 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
FAM49B-201ENST00000401979 GTF3C3Q9Y5Q9 886 aa20.24■□□□□ 0.83
FAM49B-201ENST00000401979 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
FAM49B-201ENST00000401979 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
FAM49B-201ENST00000401979 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
FAM49B-201ENST00000401979 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
FAM49B-201ENST00000401979 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
FAM49B-201ENST00000401979 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 TEFQ10587 303 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 PHKG2P15735 406 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
FAM49B-201ENST00000401979 LRRC37A3O60309 1634 aa20.21■□□□□ 0.83
FAM49B-201ENST00000401979 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
FAM49B-201ENST00000401979 SPATA31A1Q5TZJ5 1347 aa20.21■□□□□ 0.83
FAM49B-201ENST00000401979 CHL1O00533 1208 aa20.2■□□□□ 0.83
FAM49B-201ENST00000401979 CYP27B1O15528 508 aa20.2■□□□□ 0.82
FAM49B-201ENST00000401979 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
FAM49B-201ENST00000401979 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
FAM49B-201ENST00000401979 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
FAM49B-201ENST00000401979 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
FAM49B-201ENST00000401979 USP21Q9UK80 565 aa20.2■□□□□ 0.82
FAM49B-201ENST00000401979 CT47B1P0C2W7 299 aaPredicted RBP20.19■□□□□ 0.82
FAM49B-201ENST00000401979 FNBP4Q8N3X1 1017 aaPredicted RBP20.19■□□□□ 0.82
FAM49B-201ENST00000401979 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
FAM49B-201ENST00000401979 THRAP3Q9Y2W1 955 aaKnown RBP20.19■□□□□ 0.82
FAM49B-201ENST00000401979 VIRMAQ69YN4 1812 aaKnown RBP20.19■□□□□ 0.82
FAM49B-201ENST00000401979 SPATA31A5Q5VU36 1347 aa20.19■□□□□ 0.82
FAM49B-201ENST00000401979 SPATA31A7Q8IWB4 1347 aa20.19■□□□□ 0.82
FAM49B-201ENST00000401979 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
FAM49B-201ENST00000401979 DCAF5Q96JK2 942 aa20.17■□□□□ 0.82
FAM49B-201ENST00000401979 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
FAM49B-201ENST00000401979 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
FAM49B-201ENST00000401979 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
FAM49B-201ENST00000401979 FKBP8Q14318 412 aa20.16■□□□□ 0.82
FAM49B-201ENST00000401979 VPS72Q15906 364 aa20.16■□□□□ 0.82
FAM49B-201ENST00000401979 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
FAM49B-201ENST00000401979 EXOC5O00471 708 aa20.15■□□□□ 0.82
FAM49B-201ENST00000401979 ELL2O00472 640 aaPredicted RBP20.15■□□□□ 0.82
FAM49B-201ENST00000401979 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
FAM49B-201ENST00000401979 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
FAM49B-201ENST00000401979 KDM6AO15550 1401 aaPredicted RBP20.15■□□□□ 0.82
FAM49B-201ENST00000401979 AFF2P51816 1311 aa20.15■□□□□ 0.82
FAM49B-201ENST00000401979 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.82
FAM49B-201ENST00000401979 BTBD11A6QL63 1104 aa20.14■□□□□ 0.81
FAM49B-201ENST00000401979 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
FAM49B-201ENST00000401979 TWISTNBQ3B726 338 aaPredicted RBP20.14■□□□□ 0.81
FAM49B-201ENST00000401979 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.14■□□□□ 0.81
FAM49B-201ENST00000401979 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
FAM49B-201ENST00000401979 BCAR3O75815 825 aa20.14■□□□□ 0.81
FAM49B-201ENST00000401979 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
FAM49B-201ENST00000401979 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
FAM49B-201ENST00000401979 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
FAM49B-201ENST00000401979 BCL2L13Q9BXK5 485 aa20.12■□□□□ 0.81
FAM49B-201ENST00000401979 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
FAM49B-201ENST00000401979 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
FAM49B-201ENST00000401979 SLC52A2Q9HAB3 445 aa20.12■□□□□ 0.81
FAM49B-201ENST00000401979 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms