RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 LRRC7Q96NW7 1537 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-201ENST00000401921 TSHZ3Q63HK5 1081 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 G2E3Q7L622 706 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
HDAC9-201ENST00000401921 PREX1Q8TCU6 1659 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 MAP3K19Q56UN5 1328 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-201ENST00000401921 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 TMEM131LA2VDJ0 1609 aa9.47□□□□□ -0.89
HDAC9-201ENST00000401921 ZNF853P0CG23 659 aa9.46□□□□□ -0.89
HDAC9-201ENST00000401921 DDX49Q9Y6V7 483 aaKnown RBP9.46□□□□□ -0.89
HDAC9-201ENST00000401921 ROBO2Q9HCK4 1378 aa9.46□□□□□ -0.89
HDAC9-201ENST00000401921 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-201ENST00000401921 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-201ENST00000401921 PLEKHM2Q8IWE5 1019 aa9.46□□□□□ -0.89
HDAC9-201ENST00000401921 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.89
HDAC9-201ENST00000401921 ATP7BP35670 1465 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 CHL1O00533 1208 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 ST18O60284 1047 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 EYA1Q99502 592 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 DCTPP1Q9H773 170 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 ABCC4O15439 1325 aa9.46□□□□□ -0.9
HDAC9-201ENST00000401921 MAP2P11137 1827 aaKnown RBP9.45□□□□□ -0.9
HDAC9-201ENST00000401921 COL3A1P02461 1466 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-201ENST00000401921 RRP9O43818 475 aaKnown RBP9.45□□□□□ -0.9
HDAC9-201ENST00000401921 GNAI2P04899 355 aa9.45□□□□□ -0.9
HDAC9-201ENST00000401921 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
HDAC9-201ENST00000401921 CCDC30Q5VVM6 783 aa9.45□□□□□ -0.9
HDAC9-201ENST00000401921 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
HDAC9-201ENST00000401921 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-201ENST00000401921 REC8O95072 547 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 PSME1Q06323 249 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 TTC22Q5TAA0 569 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 IL1RAPL2Q9NP60 686 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 ANO2Q9NQ90 1003 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 SDSP20132 328 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 MED14O60244 1454 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 GNAT3A8MTJ3 354 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 GSPT1P15170 499 aaKnown RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 SSFA2P28290 1259 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 FGD1P98174 961 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 TEFQ10587 303 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 NLRP1Q9C000 1473 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 CLTCQ00610 1675 aaKnown RBP9.44□□□□□ -0.9
HDAC9-201ENST00000401921 RICTORQ6R327 1708 aa9.44□□□□□ -0.9
HDAC9-201ENST00000401921 MSH6P52701 1360 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 AATKQ6ZMQ8 1374 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 PTPRCP08575 1304 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 UBTFL1P0CB47 393 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-201ENST00000401921 MCCP23508 829 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 NEK4P51957 841 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 FLIIQ13045 1269 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 RABEP1Q15276 862 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 MAP4K4O95819 1239 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-201ENST00000401921 GNAI3P08754 354 aa9.43□□□□□ -0.9
HDAC9-201ENST00000401921 ADGRB2O60241 1585 aa9.42□□□□□ -0.9
HDAC9-201ENST00000401921 CPS1P31327 1500 aa9.42□□□□□ -0.9
HDAC9-201ENST00000401921 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
HDAC9-201ENST00000401921 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
HDAC9-201ENST00000401921 SURF6O75683 361 aaKnown RBP9.42□□□□□ -0.9
HDAC9-201ENST00000401921 XRCC6P12956 609 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-201ENST00000401921 SNX21Q969T3 373 aa9.42□□□□□ -0.9
HDAC9-201ENST00000401921 LRRCC1Q9C099 1032 aa9.42□□□□□ -0.9
HDAC9-201ENST00000401921 ERC2O15083 957 aa9.41□□□□□ -0.9
HDAC9-201ENST00000401921 ANXA1P04083 346 aa9.41□□□□□ -0.9
HDAC9-201ENST00000401921 KCNA6P17658 529 aa9.41□□□□□ -0.9
HDAC9-201ENST00000401921 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
HDAC9-201ENST00000401921 CDK12Q9NYV4 1490 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-201ENST00000401921 MRE11P49959 708 aa9.41□□□□□ -0.9
HDAC9-201ENST00000401921 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
HDAC9-201ENST00000401921 PIK3R4Q99570 1358 aa9.4□□□□□ -0.9
HDAC9-201ENST00000401921 TAF7Q15545 349 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-201ENST00000401921 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-201ENST00000401921 NUTM1Q86Y26 1132 aa9.4□□□□□ -0.9
HDAC9-201ENST00000401921 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-201ENST00000401921 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.9
HDAC9-201ENST00000401921 FLT4P35916 1363 aa9.4□□□□□ -0.91
HDAC9-201ENST00000401921 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 PDE1AP54750 535 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 NUCB2P80303 420 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 AIMP1Q12904 312 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 USP26Q9BXU7 913 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 SETD1BQ9UPS6 1966 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 KCNJ4P48050 445 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 C1orf141Q5JVX7 400 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms