RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 ZBTB12Q9Y330 459 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-202ENST00000401605 SLIT2O94813 1529 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 KIF1AQ12756 1690 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 FMN2Q9NZ56 1722 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.13
CLIP4-202ENST00000401605 FAM212AQ96EL1 285 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 KCNG1Q9UIX4 513 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 CLGNO14967 610 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 FAM193AP78312 1265 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 CERS3Q8IU89 383 aa8.02□□□□□ -1.13
CLIP4-202ENST00000401605 TULP4Q9NRJ4 1543 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 ABCB7O75027 752 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 VPS72Q15906 364 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 PRDM4Q9UKN5 801 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
CLIP4-202ENST00000401605 NUDT16Q96DE0 195 aaKnown RBP8.01□□□□□ -1.13
CLIP4-202ENST00000401605 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
CLIP4-202ENST00000401605 RALGAPBQ86X10 1494 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 FAM83GA6ND36 823 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 SPDYE2BA6NHP3 402 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 SPDYE6P0CI01 402 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 SPDYE2Q495Y8 402 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 CDK19Q9BWU1 502 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
CLIP4-202ENST00000401605 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 CCDC61Q9Y6R9 512 aa8□□□□□ -1.13
CLIP4-202ENST00000401605 ANP32BQ92688 251 aaKnown RBP7.99□□□□□ -1.13
CLIP4-202ENST00000401605 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
CLIP4-202ENST00000401605 CENPJQ9HC77 1338 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-202ENST00000401605 GPR37O15354 613 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 SEPT12Q8IYM1 358 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 ATP7BP35670 1465 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 USP32Q8NFA0 1604 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 ZNF622Q969S3 477 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLIP4-202ENST00000401605 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
CLIP4-202ENST00000401605 RASEFQ8IZ41 740 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 PRDM11Q9NQV5 511 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
CLIP4-202ENST00000401605 ACEP12821 1306 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
CLIP4-202ENST00000401605 NBPF8Q3BBV2 869 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
CLIP4-202ENST00000401605 PRDM16Q9HAZ2 1276 aa7.97□□□□□ -1.13
CLIP4-202ENST00000401605 PATL2C9JE40 543 aaKnown RBP7.96□□□□□ -1.13
CLIP4-202ENST00000401605 CAPN15O75808 1086 aa7.96□□□□□ -1.13
CLIP4-202ENST00000401605 PHF14O94880 888 aa7.96□□□□□ -1.13
CLIP4-202ENST00000401605 FAM43AQ8N2R8 423 aa7.96□□□□□ -1.13
CLIP4-202ENST00000401605 A0A0G2JS52 829 aa7.96□□□□□ -1.14
CLIP4-202ENST00000401605 FAM43BQ6ZT52 329 aaPredicted RBP7.96□□□□□ -1.14
CLIP4-202ENST00000401605 KRT27Q7Z3Y8 459 aa7.96□□□□□ -1.14
CLIP4-202ENST00000401605 BLMP54132 1417 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 CARNS1A5YM72 827 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 HSP90AA1P07900 732 aaKnown RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 SF3B2Q13435 895 aaKnown RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 AXDND1Q5T1B0 1012 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 GLI3P10071 1580 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 FAM98CQ17RN3 349 aaKnown RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
CLIP4-202ENST00000401605 DNAJC2Q99543 621 aaKnown RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 CWC22Q9HCG8 908 aaKnown RBP7.95□□□□□ -1.14
CLIP4-202ENST00000401605 KIAA0232Q92628 1395 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 AMHR2Q16671 573 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 ZNF526Q8TF50 670 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-202ENST00000401605 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-202ENST00000401605 CABP2Q9NPB3 220 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 SPATA31A5Q5VU36 1347 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 SPATA31A7Q8IWB4 1347 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.94□□□□□ -1.14
CLIP4-202ENST00000401605 ZC3H6P61129 1189 aaKnown RBP7.94□□□□□ -1.14
CLIP4-202ENST00000401605 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 IGSF5Q9NSI5 407 aa7.94□□□□□ -1.14
CLIP4-202ENST00000401605 BRD4O60885 1362 aaPredicted RBP7.93□□□□□ -1.14
CLIP4-202ENST00000401605 ROCK2O75116 1388 aaKnown RBP7.93□□□□□ -1.14
CLIP4-202ENST00000401605 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
CLIP4-202ENST00000401605 ANAPC15P60006 121 aa7.93□□□□□ -1.14
CLIP4-202ENST00000401605 CHRNA2Q15822 529 aa7.93□□□□□ -1.14
CLIP4-202ENST00000401605 NLRP13Q86W25 1043 aa7.93□□□□□ -1.14
CLIP4-202ENST00000401605 PPIP5K1Q6PFW1 1433 aa7.93□□□□□ -1.14
CLIP4-202ENST00000401605 ARHGEF28Q8N1W1 1705 aaKnown RBP7.92□□□□□ -1.14
CLIP4-202ENST00000401605 CABP1Q9NZU7 370 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 USP19O94966 1318 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 TRPM3Q9HCF6 1732 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-202ENST00000401605 MMP14P50281 582 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 IRX3P78415 501 aaPredicted RBP7.92□□□□□ -1.14
CLIP4-202ENST00000401605 GPATCH11Q8N954 259 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 CPDO75976 1380 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 KIAA1210Q9ULL0 1709 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 SPATA31A1Q5TZJ5 1347 aa7.92□□□□□ -1.14
CLIP4-202ENST00000401605 GCP02774 474 aa7.91□□□□□ -1.14
CLIP4-202ENST00000401605 MS4A1P11836 297 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms