RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 TNIP1Q15025 636 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
CACNA1C-217ENST00000399641 FERP16591 822 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 JAKMIP3Q5VZ66 844 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 USP5P45974 858 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-217ENST00000399641 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 TXLNAP40222 546 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 ST5P78524 1137 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 RAB3IL1Q8TBN0 382 aa13.04□□□□□ -0.32
CACNA1C-217ENST00000399641 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 ERCC3P19447 782 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 GNAI1P63096 354 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 RAPGEF3O95398 923 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 GPR162Q16538 588 aa13.03□□□□□ -0.32
CACNA1C-217ENST00000399641 IFFO1Q0D2I5 559 aa13.02□□□□□ -0.32
CACNA1C-217ENST00000399641 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.32
CACNA1C-217ENST00000399641 PRAM1Q96QH2 718 aa13.02□□□□□ -0.32
CACNA1C-217ENST00000399641 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.32
CACNA1C-217ENST00000399641 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.32
CACNA1C-217ENST00000399641 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.33
CACNA1C-217ENST00000399641 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-217ENST00000399641 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
CACNA1C-217ENST00000399641 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 USP8P40818 1118 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 MXRA7P84157 204 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 TAF4BQ92750 862 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 PAIP2Q9BPZ3 127 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 LMAN1P49257 510 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-217ENST00000399641 SHTN1A0MZ66 631 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
CACNA1C-217ENST00000399641 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 TSPY26PQ9H489 355 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 UQCRHP07919 91 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
CACNA1C-217ENST00000399641 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
CACNA1C-217ENST00000399641 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
CACNA1C-217ENST00000399641 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 SATB1Q01826 763 aa12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 FAM107BQ9H098 131 aa12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 CTNNA2P26232 953 aa12.99□□□□□ -0.33
CACNA1C-217ENST00000399641 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-217ENST00000399641 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 TDO2P48775 406 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 SIL1Q9H173 461 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 CCP110O43303 1012 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
CACNA1C-217ENST00000399641 FIBPO43427 364 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms