RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
CACNA1C-215ENST00000399637 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 MCM2P49736 904 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 TDO2P48775 406 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
CACNA1C-215ENST00000399637 EZRP15311 586 aaKnown RBP13□□□□□ -0.33
CACNA1C-215ENST00000399637 MRE11P49959 708 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
CACNA1C-215ENST00000399637 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
CACNA1C-215ENST00000399637 PANK1Q8TE04 598 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
CACNA1C-215ENST00000399637 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
CACNA1C-215ENST00000399637 ABCF2Q9UG63 623 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 RNF214Q8ND24 703 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
CACNA1C-215ENST00000399637 MBD3O95983 291 aa13□□□□□ -0.33
CACNA1C-215ENST00000399637 GOLGA6L7A0A1B0GV03 622 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 TAX1BP1Q86VP1 789 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 ST5P78524 1137 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
CACNA1C-215ENST00000399637 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 KIAA0754O94854 1291 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 GNAI2P04899 355 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 EXOC5O00471 708 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-215ENST00000399637 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 STK3Q13188 491 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 CYP46A1Q9Y6A2 500 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 IQCEQ6IPM2 695 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 DYDC1Q8WWB3 177 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 CUL5Q93034 780 aa12.97□□□□□ -0.33
CACNA1C-215ENST00000399637 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 NEK4P51957 841 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 SPC24Q8NBT2 197 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
CACNA1C-215ENST00000399637 FAM193AP78312 1265 aa12.96□□□□□ -0.34
CACNA1C-215ENST00000399637 NFKBIBQ15653 356 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 GPR162Q16538 588 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 CDKL5O76039 1030 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 PNISRQ8TF01 805 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 FIBPO43427 364 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-215ENST00000399637 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 ERLIN1O75477 346 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 CCDC192P0DO97 292 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 CCDC112Q8NEF3 446 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 ME1P48163 572 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 TRAK2O60296 914 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
CACNA1C-215ENST00000399637 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 CEP57L1Q8IYX8 460 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-215ENST00000399637 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms