RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
CACNA1C-208ENST00000399601 TNIP1Q15025 636 aa13.06□□□□□ -0.32
CACNA1C-208ENST00000399601 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
CACNA1C-208ENST00000399601 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
CACNA1C-208ENST00000399601 FERP16591 822 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 JAKMIP3Q5VZ66 844 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 USP5P45974 858 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-208ENST00000399601 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 TXLNAP40222 546 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 NASPP49321 788 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 ST5P78524 1137 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 RAB3IL1Q8TBN0 382 aa13.04□□□□□ -0.32
CACNA1C-208ENST00000399601 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 ERCC3P19447 782 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 GNAI1P63096 354 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 RAPGEF3O95398 923 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 GPR162Q16538 588 aa13.03□□□□□ -0.32
CACNA1C-208ENST00000399601 IFFO1Q0D2I5 559 aa13.02□□□□□ -0.32
CACNA1C-208ENST00000399601 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.32
CACNA1C-208ENST00000399601 PRAM1Q96QH2 718 aa13.02□□□□□ -0.32
CACNA1C-208ENST00000399601 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.32
CACNA1C-208ENST00000399601 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.32
CACNA1C-208ENST00000399601 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.33
CACNA1C-208ENST00000399601 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.33
CACNA1C-208ENST00000399601 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
CACNA1C-208ENST00000399601 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
CACNA1C-208ENST00000399601 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 USP8P40818 1118 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 MXRA7P84157 204 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 PPP1R12AO14974 1030 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 TAF4BQ92750 862 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 PAIP2Q9BPZ3 127 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 LMAN1P49257 510 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-208ENST00000399601 SHTN1A0MZ66 631 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
CACNA1C-208ENST00000399601 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 TSPY26PQ9H489 355 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 UQCRHP07919 91 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
CACNA1C-208ENST00000399601 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
CACNA1C-208ENST00000399601 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
CACNA1C-208ENST00000399601 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 SATB1Q01826 763 aa12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 FAM107BQ9H098 131 aa12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 CTNNA2P26232 953 aa12.99□□□□□ -0.33
CACNA1C-208ENST00000399601 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
CACNA1C-208ENST00000399601 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 TDO2P48775 406 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 SIL1Q9H173 461 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 CCP110O43303 1012 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CACNA1C-208ENST00000399601 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms