RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NAIPQ13075 1403 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
USP47-203ENST00000399455 IDI1Q13907 227 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
USP47-203ENST00000399455 TRMT112Q9UI30 125 aaKnown RBP9.51□□□□□ -0.89
USP47-203ENST00000399455 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 ANKRD18BA2A2Z9 1011 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 TRIM22Q8IYM9 498 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 HYPKQ9NX55 129 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
USP47-203ENST00000399455 CTNNA3Q9UI47 895 aa9.5□□□□□ -0.89
USP47-203ENST00000399455 DDX11L8A8MPP1 907 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
USP47-203ENST00000399455 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 SPTY2D1Q68D10 685 aaPredicted RBP9.49□□□□□ -0.89
USP47-203ENST00000399455 NSD2O96028 1365 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 NFE2L2Q16236 605 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 NBPF6Q5VWK0 638 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
USP47-203ENST00000399455 NBPF4Q96M43 638 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 ABCC5O15440 1437 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 DESP17661 470 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 GSTO1P78417 241 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 BEGAINQ9BUH8 593 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.49□□□□□ -0.89
USP47-203ENST00000399455 SYCP2Q9BX26 1530 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 BAG6P46379 1132 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 FKBP4Q02790 459 aaKnown RBP eCLIP9.49□□□□□ -0.89
USP47-203ENST00000399455 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 SIL1Q9H173 461 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 TRPM2O94759 1503 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 HSPA2P54652 639 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 IFIT5Q13325 482 aaKnown RBP9.49□□□□□ -0.89
USP47-203ENST00000399455 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
USP47-203ENST00000399455 CDC45O75419 566 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 MAP3K1Q13233 1512 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 ZFYVE16Q7Z3T8 1539 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 MATR3P43243 847 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■■■■ 30.2
USP47-203ENST00000399455 SYCP1Q15431 976 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 FOXD4L5Q5VV16 416 aaPredicted RBP9.48□□□□□ -0.89
USP47-203ENST00000399455 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 FOXD4L4Q8WXT5 416 aaPredicted RBP9.48□□□□□ -0.89
USP47-203ENST00000399455 CUL5Q93034 780 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 UBAC1Q9BSL1 405 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 SEC63Q9UGP8 760 aaKnown RBP9.48□□□□□ -0.89
USP47-203ENST00000399455 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 UGGT2Q9NYU1 1516 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 CDKL5O76039 1030 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
USP47-203ENST00000399455 BICD2Q8TD16 824 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 ZMYM3Q14202 1370 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 LDHCP07864 332 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 WDR78Q5VTH9 848 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 HLA-DOAP06340 250 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 CCDC73Q6ZRK6 1079 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 NOL7Q9UMY1 257 aaKnown RBP9.47□□□□□ -0.89
USP47-203ENST00000399455 RPRD2Q5VT52 1461 aaKnown RBP9.47□□□□□ -0.89
USP47-203ENST00000399455 MYD88Q99836 296 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
USP47-203ENST00000399455 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 GCC1Q96CN9 775 aa9.47□□□□□ -0.89
USP47-203ENST00000399455 ATP10BO94823 1461 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.89
USP47-203ENST00000399455 ANKRD1Q15327 319 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 CABP5Q9NP86 173 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 IL2RBP14784 551 aa9.46□□□□□ -0.89
USP47-203ENST00000399455 AACSQ86V21 672 aa9.46□□□□□ -0.9
USP47-203ENST00000399455 SCAF11Q99590 1463 aaKnown RBP9.46□□□□□ -0.9
USP47-203ENST00000399455 ZNF772Q68DY9 489 aaPredicted RBP9.46□□□□□ -0.9
USP47-203ENST00000399455 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
USP47-203ENST00000399455 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
USP47-203ENST00000399455 FOSBP53539 338 aa9.46□□□□□ -0.9
USP47-203ENST00000399455 EXOSC9Q06265 439 aaKnown RBP9.46□□□□□ -0.9
USP47-203ENST00000399455 OGFOD1Q8N543 542 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 WASF1Q92558 559 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 MKNK2Q9HBH9 465 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 SKOR2Q2VWA4 1001 aaPredicted RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 ZGPATQ8N5A5 531 aaKnown RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 ABCF2Q9UG63 623 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 GRM1Q13255 1194 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 FEZ1Q99689 392 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 ACEP12821 1306 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 BAG3O95817 575 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 PIP4K2AP48426 406 aaPredicted RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 NOB1Q9ULX3 412 aaKnown RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 EIF2AK4Q9P2K8 1649 aaKnown RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
USP47-203ENST00000399455 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
USP47-203ENST00000399455 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms