RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RAPGEF3O95398 923 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 RFC5P40937 340 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 TBX4P57082 545 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 PNISRQ8TF01 805 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 PRR12Q9ULL5 1215 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 MAGI2Q86UL8 1455 aa7.92□□□□□ -1.14
TRAPPC13-202ENST00000399438 HDLBPQ00341 1268 aaKnown RBP7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 DIP2CQ9Y2E4 1556 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 DUOX2Q9NRD8 1548 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 TSNAXIP1Q2TAA8 658 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 CDCA8Q53HL2 280 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 STAG1Q8WVM7 1258 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 MSH5O43196 834 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 SSFA2P28290 1259 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 C9orf131Q5VYM1 1079 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 SENP7Q9BQF6 1050 aa7.91□□□□□ -1.14
TRAPPC13-202ENST00000399438 ARHGEF40Q8TER5 1519 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 EPB41L2O43491 1005 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 WDHD1O75717 1129 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 WDR78Q5VTH9 848 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 CDCA7LQ96GN5 454 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 TINF2Q9BSI4 451 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 TBC1D2BQ9UPU7 963 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 HOXA2O43364 376 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 PLIN1O60240 522 aa7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 CHMP4BQ9H444 224 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 QTRT2Q9H974 415 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-202ENST00000399438 REREQ9P2R6 1566 aa7.9□□□□□ -1.15
TRAPPC13-202ENST00000399438 ERBINQ96RT1 1412 aa7.9□□□□□ -1.15
TRAPPC13-202ENST00000399438 AMOTL1Q8IY63 956 aa7.9□□□□□ -1.15
TRAPPC13-202ENST00000399438 EIF2AK4Q9P2K8 1649 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 SPATA31E1Q6ZUB1 1445 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 SOWAHDA6NJG2 315 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 TMUB1Q9BVT8 246 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 DHX29Q7Z478 1369 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 YEATS2Q9ULM3 1422 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 CFAP69A5D8W1 941 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 ZNF500O60304 480 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 JAZF1Q86VZ6 243 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 RPS6KC1Q96S38 1066 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 JADE2Q9NQC1 790 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 NRBP1Q9UHY1 535 aa7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 G3BP2Q9UN86 482 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-202ENST00000399438 IBSPP21815 317 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 COL4A3BPQ9Y5P4 624 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 SCYL1Q96KG9 808 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 A2MP01023 1474 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 UNC13BO14795 1591 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 CCDC189A1A4V9 331 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 TNNT2P45379 298 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 CCDC85AQ96PX6 553 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 BACH2Q9BYV9 841 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 CRISPLD2Q9H0B8 497 aa7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 FBXO9Q9UK97 447 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC13-202ENST00000399438 DEPDC5O75140 1603 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 CCDC96Q2M329 555 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 LDLRAD1Q5T700 205 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 DDX27Q96GQ7 796 aaKnown RBP7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 PANK3Q9H999 370 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 ARHGEF10LQ9HCE6 1279 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 PCDH12Q9NPG4 1184 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 PRKAG2Q9UGJ0 569 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 ATP10AO60312 1499 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 GNPATO15228 680 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 BIRC2Q13490 618 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 ERICH6BQ5W0A0 696 aa7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 IQSEC3Q9UPP2 1182 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC13-202ENST00000399438 RNF17Q9BXT8 1623 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 SIGLEC1Q9BZZ2 1709 aa7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 ZBED9Q6R2W3 1325 aa7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 DMGDHQ9UI17 866 aaKnown RBP7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 KDM5DQ9BY66 1539 aa7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 CCDC144AA2RUR9 1427 aa7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 KIF3BO15066 747 aa7.86□□□□□ -1.15
TRAPPC13-202ENST00000399438 AGLP35573 1532 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 DISP3Q9P2K9 1392 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 FAM212AQ96EL1 285 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 ANP32EQ9BTT0 268 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 BSDC1Q9NW68 430 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 MROH1Q8NDA8 1641 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 ZNF746Q6NUN9 644 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 CCAR1Q8IX12 1150 aaKnown RBP7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 FBXO22Q8NEZ5 403 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 CXorf38Q8TB03 319 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 PPP4R2Q9NY27 417 aa7.85□□□□□ -1.15
TRAPPC13-202ENST00000399438 PYGBP11216 843 aa7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 PDE4AP27815 886 aa7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 SAFB2Q14151 953 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 ZNF280DQ6N043 979 aa7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 FMNL3Q8IVF7 1028 aa7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 FARP1Q9Y4F1 1045 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC13-202ENST00000399438 PRDM15P57071 1507 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms