RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
ITSN1-207ENST00000399338 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-207ENST00000399338 GOLGA6L1Q8N7Z2 621 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-207ENST00000399338 CXorf56Q9H5V9 222 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
ITSN1-207ENST00000399338 CLTCL1P53675 1640 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 ATP10AO60312 1499 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
ITSN1-207ENST00000399338 CDC45O75419 566 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 PACS2Q86VP3 889 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
ITSN1-207ENST00000399338 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
ITSN1-207ENST00000399338 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 RRP15Q9Y3B9 282 aaKnown RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 SMARCA5O60264 1052 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 PNMA6AP0CW24 399 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-207ENST00000399338 MX1P20591 662 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 NBPF20Q3BBV1 942 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 MED4Q9NPJ6 270 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
ITSN1-207ENST00000399338 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.29
ITSN1-207ENST00000399338 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.29
ITSN1-207ENST00000399338 ST18O60284 1047 aa13.21□□□□□ -0.29
ITSN1-207ENST00000399338 SART3Q15020 963 aaKnown RBP13.21□□□□□ -0.29
ITSN1-207ENST00000399338 RNF20Q5VTR2 975 aa13.21□□□□□ -0.29
ITSN1-207ENST00000399338 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.29
ITSN1-207ENST00000399338 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.3
ITSN1-207ENST00000399338 TRIM27P14373 513 aa13.21□□□□□ -0.3
ITSN1-207ENST00000399338 ST5P78524 1137 aa13.21□□□□□ -0.3
ITSN1-207ENST00000399338 PLCB2Q00722 1185 aa13.21□□□□□ -0.3
ITSN1-207ENST00000399338 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.3
ITSN1-207ENST00000399338 ADGRL2O95490 1459 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
ITSN1-207ENST00000399338 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 SUFUQ9UMX1 484 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 TPM4P67936 248 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 LRMPQ12912 555 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 ITPRIPQ8IWB1 547 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
ITSN1-207ENST00000399338 CCDC189A1A4V9 331 aa13.19□□□□□ -0.3
ITSN1-207ENST00000399338 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
ITSN1-207ENST00000399338 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
ITSN1-207ENST00000399338 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
ITSN1-207ENST00000399338 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
ITSN1-207ENST00000399338 MAGEA9P43362 315 aa13.19□□□□□ -0.3
ITSN1-207ENST00000399338 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
ITSN1-207ENST00000399338 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
ITSN1-207ENST00000399338 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITSN1-207ENST00000399338 DNAJC21Q5F1R6 531 aaKnown RBP13.18□□□□□ -0.3
ITSN1-207ENST00000399338 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 DEF6Q9H4E7 631 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 MCCP23508 829 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 CLCN6P51797 869 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
ITSN1-207ENST00000399338 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
ITSN1-207ENST00000399338 IRF6O14896 467 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
ITSN1-207ENST00000399338 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
ITSN1-207ENST00000399338 NYAP1Q6ZVC0 841 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 PTPRGP23470 1445 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
ITSN1-207ENST00000399338 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-207ENST00000399338 GPS2Q13227 327 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
ITSN1-207ENST00000399338 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
ITSN1-207ENST00000399338 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
ITSN1-207ENST00000399338 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
ITSN1-207ENST00000399338 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 RNF217Q8TC41 542 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 TCHHQ07283 1943 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
ITSN1-207ENST00000399338 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
ITSN1-207ENST00000399338 TDO2P48775 406 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms